| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0389 |
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| Symbol | |
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| ID | 5170128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 377555 |
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| End bp | 378520 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640562890 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001243991 |
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| Protein GI | 148269531 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGCTCAAGT ACATCGCACG TAGATTGATC ATCATGATTC CTGAGCTCAT AATCATCTCT
TTCATAGTTT TCATCATCAT GGAGGCGGCT CCAGGAGATT TCCTGGACAT GTACCGTCTC
GATCCTTCCG TTTCTCAGCA GTTCCTCGAG AAGATGGAAA AGGAGCTTGG CCTGGACAAG
CCCTGGATCG TTCAGTACGG CATCTGGCTG AAAAACGTTT TGAAAGGAGA TTTTGGTTAC
TCGTTCTACT ACAGAAGGCC CGTTTCCACA CTCATCTGGG AGAGGGTCTT CGCTACGGTG
ATACTCTCCG TTTCTTCCCT TGCGTTCGAG TGGTTGCTTG GAATAATCGT CGGTGTTTTC
TCGGCTCTGA AGAAGTACAG CATCTGGGAT AAGATTCTCA CAGTTGTCGC TTTCAGTGGA
ATTGCCCTTC CAGGGTTTTT CCTGGCCATT CTGCTCCTTT ACATGGCTGC GAAGACCGGC
TGGTTTCCAA TCGCCGGTAT GGTCTCGGTG AATCACAACC AGATGACAAC CTGGGAGAAG
TTCAAGGATA TCGCATCTCA TCTTGTTCTT CCAACCATCG CTCTTGGTTT CGGTGGTTTT
GCTTCCCTCA TGAGATACAT GAGAGGTAGT CTTCTCGACG TGCTGAACGA GGACTACGTG
GAATTTGCCC GTGCGAAAGG AATGCCAGAA CGTGTGGTGA TATACAAGCA CGCCCTGAGG
AACGCTATCA ACCCCATGAT CACTTTCCTT GGGTTCAGTA TTTCCAACGT TCTCGGAGGA
GCGGTCATCA TAGAGAACAT CTTTGCCTGG CCCGGCATGG GAAGGCTCAT TTACCAGGCA
CTCCTTCAGC AGGACATTTA CATCGTTATG GCGTCCGCCG TGATCAGTGC GATAATGCTC
GTGATTGGTA ACCTTGTGGC GGATGTGCTT CTCGCCGCTG TGGACCCAAG GGTCAGATTC
GAGTGA
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| Protein sequence | MLKYIARRLI IMIPELIIIS FIVFIIMEAA PGDFLDMYRL DPSVSQQFLE KMEKELGLDK
PWIVQYGIWL KNVLKGDFGY SFYYRRPVST LIWERVFATV ILSVSSLAFE WLLGIIVGVF
SALKKYSIWD KILTVVAFSG IALPGFFLAI LLLYMAAKTG WFPIAGMVSV NHNQMTTWEK
FKDIASHLVL PTIALGFGGF ASLMRYMRGS LLDVLNEDYV EFARAKGMPE RVVIYKHALR
NAINPMITFL GFSISNVLGG AVIIENIFAW PGMGRLIYQA LLQQDIYIVM ASAVISAIML
VIGNLVADVL LAAVDPRVRF E
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