| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0388 |
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| Symbol | |
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| ID | 5171061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 375991 |
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| End bp | 377541 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640562889 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001243990 |
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| Protein GI | 148269530 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGAGG AAAAGACGAT GATAGAGAAC GGGGAAATAG AGTTTAAGGA AAGGGTCCTT
TCCAGGAGGG AACTCGTCTG GAGAGCCTTC AAAAGAAACA AACTCGGAAT GTTCGGGCTG
TACGTTCTGA TCGTCCTCTA TCTCATGGCG TTGTTCGCGG ATTTTCTCTC CCCGCACCAT
CCCTACGAAC AGTCTCTCAA GCATTCCTTC GCTCCTCCCA CGAAGATACA CAGGGAGTAC
AAGGGAGAAC GAGTGGGTGC CTACGTGCTT CCCACGATAA GCTACGTGGA CAAAGCAACT
TTCGAGAGAA AATTCTACGA AATGCTCTTC CCGAAAAGGC TCGTTCTCGA TGTTTTCGGA
ACACAGGTTG AGTACGAAAT CGGAAAAGAC GGTGTAACGG GATTCTCTTT CATGCTGGAC
GAAGAGTATT ACATCGTTCC AAAGGACGGC ACCATGAAAT ACGCCGGTTC AACAACGAAA
GTGGTTGATT ACCTTCTGTT CGGATACGAC GAAAAGGTTC TAACGAAAGG AGAGGCAGAT
ATAGAAACCT CTTCCGAAGC CGCGAAAGAC ACGTACTTTG GGAAATACGG TTTCAGACTT
GGCCTGAATT CCCCCGATGA GATCGAAAAG GTCGTCATAA AAGAGAAGCT CAACATGATC
CTCGTGAAAA AAGGTGAAGA CATTGAGATG ATCACAGGAA AGGTGGTCGA TTACGATTAC
AAAACGTATC CGGTAAAATG GTTCATCAAA TCTTGGGGTG GTGACAGAAA GCACAGACTC
GGTTATCTTT TTTGGCTCAT ACCCTTCAGG TACCACCTCT TCGGTGTGGA CAATTATGAC
AACAACGAAT ACGTGAGATT CTACATAATG GGTGCGGATC AGTACGGTAG AGACATCTGG
AGCAGGCTCG TGTTTGCTTC GAGGATCTCC CTTTCCATTG GTTTCATAGG AATGTTCATC
ACCTTTGCGC TCTCTTTGAT CTTTGGCGGA ATCTCCGGAT ACTACGGTGG ACTCGTGGAC
GAATTCATGA TGAGGTTCTC CGAGATCATC ATGTCGCTTC CGGGATTCTA CCTTCTGATC
CTTTTGAGGT CGTTGCTTCC CCTGGACATC CCATCCACAC AGGTGTACAT CTTGCTTGTC
TTCATACTCT CTTTCATCGG ATGGGCGGGC AGAGCCAGGG TGATAAGGGG AATGGTGCTT
TCCATAAAGC AACGGGAGTT CGTGGAGGCA GCAAAGGCGC TCGGCTTTCC AGACACGAAG
ATCCTCTTTC GTCACGTTCT TCCAAACACG ACGAGCTATT TGATAGTTGC CGCCACTCTT
GCAATACCCG GATACATCCT GGGGGAGGCG AGTCTCAGCT TTCTGGGTCT CGGTATAAGA
GAACCCGATG CAAGCTGGGG GCTCATGCTC GCACAGGCTC AGAACGTCAC CTACATGACG
AAGTACCCCT GGCTTCTCAT ACCCGGTATC TTCATCTTCA TCACCGTGCT TTCTTTCAAC
TTCGTTGGTG ACGCGTTGAG AGACGCTCTG GATCCGAGGT CTCTCGGATA G
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| Protein sequence | MAEEKTMIEN GEIEFKERVL SRRELVWRAF KRNKLGMFGL YVLIVLYLMA LFADFLSPHH
PYEQSLKHSF APPTKIHREY KGERVGAYVL PTISYVDKAT FERKFYEMLF PKRLVLDVFG
TQVEYEIGKD GVTGFSFMLD EEYYIVPKDG TMKYAGSTTK VVDYLLFGYD EKVLTKGEAD
IETSSEAAKD TYFGKYGFRL GLNSPDEIEK VVIKEKLNMI LVKKGEDIEM ITGKVVDYDY
KTYPVKWFIK SWGGDRKHRL GYLFWLIPFR YHLFGVDNYD NNEYVRFYIM GADQYGRDIW
SRLVFASRIS LSIGFIGMFI TFALSLIFGG ISGYYGGLVD EFMMRFSEII MSLPGFYLLI
LLRSLLPLDI PSTQVYILLV FILSFIGWAG RARVIRGMVL SIKQREFVEA AKALGFPDTK
ILFRHVLPNT TSYLIVAATL AIPGYILGEA SLSFLGLGIR EPDASWGLML AQAQNVTYMT
KYPWLLIPGI FIFITVLSFN FVGDALRDAL DPRSLG
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