| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0387 |
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| Symbol | |
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| ID | 5170921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 375408 |
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| End bp | 375989 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640562888 |
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| Product | RNA polymerase factor sigma-70 |
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| Protein accession | YP_001243989 |
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| Protein GI | 148269529 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02859] RNA polymerase sigma-H factor
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTGAAAT ACAGACTGAG AAGTAAGAGA GTTGAAGAAC TCGTTGAGTA CGCGCAGGCA
GGATTCAAAG AAGCCATCGA CCTCATTGTT GAGAAGTATT ACCCTATGGT TGTTAAGATC
GCTTCCCAGT ATTTTGCGAG CTGGGCCGAA CACGAAGATA TAGTTCAAAA CGGCCTTGTG
GGATTGATAA AGGCGATTTT CTATTACGAT AAAACCAAAA GCTCTTTCAC GTCTTTTGCA
TGGAGGAGTG TTGACTCCGA GATAAAGTCC TTTCTCACTT ATCTGAACAG AAAGAAGAAC
AGGATGCTCT CAGACGCTGT GAACGTGGAT GGTATGGAAA AAGAGGAAGA TGACGCACCT
TTTGAAGTGC CCGATAGCGA GACCGATGTT GCCAGAAGCG CATTTTCTGG CATAATTTTA
GAAACAGTCC TTGAACTATT GAATGAAAAA GAAAAAGAGA TCTTTCTCAG ATGGCTTGAT
GGATGCTCAT ACAGCGAGAT AGCGAAAGAG CTCGGTGTGA ACACAAAGAA AGTTGACAAC
ACGGTTCAGA AGGTGAAGAG AATGATTTCT GGATTAGGGT GA
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| Protein sequence | MLKYRLRSKR VEELVEYAQA GFKEAIDLIV EKYYPMVVKI ASQYFASWAE HEDIVQNGLV
GLIKAIFYYD KTKSSFTSFA WRSVDSEIKS FLTYLNRKKN RMLSDAVNVD GMEKEEDDAP
FEVPDSETDV ARSAFSGIIL ETVLELLNEK EKEIFLRWLD GCSYSEIAKE LGVNTKKVDN
TVQKVKRMIS GLG
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