Gene Tpet_0380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0380 
Symbol 
ID5170640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand- 
Start bp368262 
End bp368756 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content52% 
IMG OID640562881 
Producttartrate/fumarate subfamily Fe-S type hydro-lyase beta subunit 
Protein accessionYP_001243982 
Protein GI148269522 
COG category[C] Energy production and conversion 
COG ID[COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain 
TIGRFAM ID[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGGATTG AAGATCTGAA AGCCGGTCAG GAAATTCGTT ACTCCGGTAA GCTCATCGTG 
ATGAGAGATC AGGCTCAAAG ACGCTTGAAA GAAATCGTTG ATAGAGGAGA AGAACCACCG 
GTGGATCTCA GGGGTCAAAT TGTCTTTTAC GCGGGTCCCG CCAAAACGCC GTCTGGAAAG 
CCCGTGGGTG CCATAGGACC CACCACGAGT GCTCGAATGG ACGACTACCT GGAGATGCTT 
TTCAAATTGG GAGCCATCGC AACGATAGGG AAGGGAAAGC GTTCAAAAAA GGCGATAGAG 
GCCTGTAAGA AGTGGAAGAG GGTTTATTTC GTTACCCCAA GCGGCACGGC CGCTGCCCTC 
TCGAAAAGGG TGAAGAAATC GAGAGTTTTG GCCTTTGAAG ACCTCGGGCC CGAAGCGATC 
TACGAGATAG AAGTGGAGGA TTTTCCCCTC ATCGTGGCGA TCGACAGCAG TGGGAACACG 
ATTTTCAAGG AGTGA
 
Protein sequence
MRIEDLKAGQ EIRYSGKLIV MRDQAQRRLK EIVDRGEEPP VDLRGQIVFY AGPAKTPSGK 
PVGAIGPTTS ARMDDYLEML FKLGAIATIG KGKRSKKAIE ACKKWKRVYF VTPSGTAAAL 
SKRVKKSRVL AFEDLGPEAI YEIEVEDFPL IVAIDSSGNT IFKE