Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0369 |
Symbol | |
ID | 5171426 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 355968 |
End bp | 357632 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640562872 |
Product | dihydroxy-acid dehydratase |
Protein accession | YP_001243973 |
Protein GI | 148269513 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGAGTG ATGTGATAAA GAAAGGTCTC GAAAGGGCTC CCCATAGATC ACTTTTGAAA GCGCTCGGAA TAACGGACGA CGAAATGCGA AGGCCTTTCA TCGGCATAGT GTCCTCGTGG AACGAGATCA TTCCCGGCCA TGTCCACCTT GACAAGGTCG TTGAAGCGGT GAAAGCCGGT GTGAGAATGG CCGGGGGAGT TCCCTTCGTC TTTCCAACGA TCGGGATCTG TGACGGAATA GCAATGGATC ACAGGGGGAT GAAGTTTTCC TTGCCCTCGA GGGAACTCAT AGCGGACTCC ATAGAGATCG TTGCAAGCGG TTTCCCCTTC GATGGTTTGG TCTTCGTCCC CAACTGCGAC AAGATCACAC CCGGCATGAT GATGGCCATG GGAAGATTGA ACATCCCGTC CGTTCTGATA TCCGGCGGTC CCATGCTCGC AGGTCGCTAC AACGGCAGAG ACATCGATCT CATCACCGTC TTCGAAGCGG TTGGTGGATA CAAAGTGGGA AAAGTCGATG AAGAAACGCT CAAAGCGATA GAAGACCTCG CGTGTCCCGG TGCCGGTTCG TGTGCTGGAT TGTTCACCGC GAACACGATG AACTCTCTGG CGGAAGCTCT CGGAATTGCA CCGAGGGGGA ATGGGACTGT ACCGGCCGTC CACGCGAAGA GGTTGAGAAT GGCGAAAGAA GCGGGGATGC TCGTTGTGGA ACTCGTGAAA AGAGATGTAA AACCAAGGGA TATCGTCACT CTGGACTCTT TCATGAACGC TGTCATGGTG GACCTCGCAA CGGGAGGTTC CACGAACACA GTTCTGCATT TGAAGGCGAT AGCCGAGAGT TTTGGAATAG ATTTCGATAT AAAGCTCTTT GACGAACTCA GCAGGAAGAT TCCTCACATC TGCAACATCT CTCCCGTTGG TCCGTACCAC ATCCAGGATC TCGACGATGC TGGTGGTATC TACGCTGTGA TGAAACGTCT CCAGGAAAAT GGTCTTTTGA AGGAAGACGC CATGACCATC TATTTGAGAA AGATTGGAGA TCTCGTCAGA GAGGCTAAGA TCCTGAATGA AGATGTGATC AGGCCCTTCG ATAATCCGTA CCACAAAGAG GGCGGACTCG GTATCCTCTT CGGGAACCTC GCTCCAGAAG GAGCGGTTGC CAAACTCTCC GGTGTTCCCG AGAAGATGAT GCACCACGTT GGCCCGGCCG TCGTCTTTGA AGACGGAGAA GAGGCGACAA AAGCCATTCT ATCTGGAAAG ATCAAAAAAG GAGATGTGGT TGTGATCCGC TACGAAGGGC CGAAGGGCGG TCCCGGGATG AGAGAGATGC TCTCACCCAC CTCCGCCATC GTGGGGATGG GCCTTGCGGA GGACGTGGCT CTCATCACAG ACGGTAGGTT CTCGGGTGGA TCGCACGGTG CCGTGATAGG TCACGTTTCT CCAGAAGCGG CAGAAGGCGG TCCTATAGGT ATCGTGAAAG ACGGGGACCT CATCGAGATA GATTTTGAAA AGAGAACCCT GAATCTCTTG ATCTCAGACG AAGAGTTCGA AAGAAGAATG AAAGAGTTCA CGCCTCTGGT GAAAGAAGTG GACAGCGATT ACCTGAGAAG GTACGCATTC TTCGTACAGT CGGCGAGCAA GGGGGCAATC TTCAGGAAGC CCTGA
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Protein sequence | MRSDVIKKGL ERAPHRSLLK ALGITDDEMR RPFIGIVSSW NEIIPGHVHL DKVVEAVKAG VRMAGGVPFV FPTIGICDGI AMDHRGMKFS LPSRELIADS IEIVASGFPF DGLVFVPNCD KITPGMMMAM GRLNIPSVLI SGGPMLAGRY NGRDIDLITV FEAVGGYKVG KVDEETLKAI EDLACPGAGS CAGLFTANTM NSLAEALGIA PRGNGTVPAV HAKRLRMAKE AGMLVVELVK RDVKPRDIVT LDSFMNAVMV DLATGGSTNT VLHLKAIAES FGIDFDIKLF DELSRKIPHI CNISPVGPYH IQDLDDAGGI YAVMKRLQEN GLLKEDAMTI YLRKIGDLVR EAKILNEDVI RPFDNPYHKE GGLGILFGNL APEGAVAKLS GVPEKMMHHV GPAVVFEDGE EATKAILSGK IKKGDVVVIR YEGPKGGPGM REMLSPTSAI VGMGLAEDVA LITDGRFSGG SHGAVIGHVS PEAAEGGPIG IVKDGDLIEI DFEKRTLNLL ISDEEFERRM KEFTPLVKEV DSDYLRRYAF FVQSASKGAI FRKP
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