| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0325 |
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| Symbol | |
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| ID | 5171416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 306408 |
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| End bp | 307058 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640562828 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001243930 |
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| Protein GI | 148269470 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCGGAAT GGTTGAGCGT AATTGTGGAT AATCTACCGC TCCTTCTGAA GGGTGCCCTG
CGCACCCTTC AGCTTACTTC TCTGGCCGTT CTCATAGGGC TCGCCATAGG GATCTTCGTC
GGCATGGGAA GGCTCTCGAA GTACCGGATC ATAAGGTACC CGTCTTCTAT CTACGTGGAG
TTTCTCAGGG GAACACCCCT GATGGTCCAG CTGTTTCTCG TGTACTTTGG ACTTCCCGAA
CTGGGGCTCG AATTCGACAG GTTCACAGCC GCTGTCGTTG CGCTCGGAAT AAACAGCGGT
GCGTACGTTG CCGAGATCGT GAGGGCGGGG ATACAATCCG TTCCAAAAGG ACAGTACGAG
GCGGCGAGAT CTCTCGGTAT GTCACACGCA CAGGCGATGA TCTATGTGAT CCTTCCCCAG
GCCTTCAGGC ACATACTTCC GGCCCTCGGA AACGAGTTCA TCGCCCTCGC AAAGGACAGT
TCCCTCGCCA TGGTGATAGG AACCGTGGAA CTCATGAGAA GCGCTCAATA CATCGTGAGC
AGAACCTTCA TGAGTTTCCC CATATACGGT GGTGTTGCGC TGATCTACTT TGCCATAACT
TTCTCCGTTT CCAGACTGGT GAAGTTCGTG GAAGGAAGGT TGAAAGTATG A
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| Protein sequence | MPEWLSVIVD NLPLLLKGAL RTLQLTSLAV LIGLAIGIFV GMGRLSKYRI IRYPSSIYVE
FLRGTPLMVQ LFLVYFGLPE LGLEFDRFTA AVVALGINSG AYVAEIVRAG IQSVPKGQYE
AARSLGMSHA QAMIYVILPQ AFRHILPALG NEFIALAKDS SLAMVIGTVE LMRSAQYIVS
RTFMSFPIYG GVALIYFAIT FSVSRLVKFV EGRLKV
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