| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0250 |
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| Symbol | |
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| ID | 5171313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 239552 |
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| End bp | 240292 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640562753 |
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| Product | beta-lactamase domain-containing protein |
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| Protein accession | YP_001243855 |
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| Protein GI | 148269395 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATCACGA ATCTTTCCGA CAGAGTGTTC GTGATAGGAA CAGGAACGTC GGCGAACAGT
GTGCTTGTCT GTGGAAAGAA ATTCTGTGTA CTCTTCGATT CAACACTTTT TCCTGAAAAG
GCAAGGAAGA TCAAAGAATT CACCACAGAA ATTCTGGGCA AAGAAATCGT CGTTGTCTTC
AACACGCATT ACCATCCCGA CCACACTTTC GGAAACGAGG TTTTTGACAG AATCATATCT
CACAGTCTCA CCAGAAAAGC CCTGGAAGAA ATGGATGAAG AGTACATAAG AAAGATCGGA
GTGGAGGTTT CTTTGAAGTT TCCAGATGAG ACCTTCTCCG AAAGAGAAAA TTACAGATTT
GGAGACATCG TGGTGGAAGC GGTTCACCTG GGAGGACACA CCCCGGATTC TTCGATCTTC
GTTTTGAAGA ACGAAAAAAT CGTCATCTGC GGGGACCTTC TGACAACCGG CATCCACGCC
GAAATAGTCA CGGACAGTGA CCTCTTCGAA TGGATAGAAG CGCTCAGCGA AATCGAAAAA
ATACGGGCAG ATTACTTCGT ACCGGGTCAC GGAAAAGTGG GCACCATCGA AGATGTCAGA
AACATGAAAG ACTACATCTC AAAAGTCCTG CGCTTCAGAG AAGGCAGTGT GAAACACTCA
GAACTCCTGG AAGACCCGAA TTTCATCAAC AGGGAACACC CGGAGCTTCT GAGCTGGGGG
CTGGAAAACA TCATTCGTTG A
|
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| Protein sequence | MITNLSDRVF VIGTGTSANS VLVCGKKFCV LFDSTLFPEK ARKIKEFTTE ILGKEIVVVF
NTHYHPDHTF GNEVFDRIIS HSLTRKALEE MDEEYIRKIG VEVSLKFPDE TFSERENYRF
GDIVVEAVHL GGHTPDSSIF VLKNEKIVIC GDLLTTGIHA EIVTDSDLFE WIEALSEIEK
IRADYFVPGH GKVGTIEDVR NMKDYISKVL RFREGSVKHS ELLEDPNFIN REHPELLSWG
LENIIR
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