| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0227 |
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| Symbol | |
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| ID | 5171010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 222094 |
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| End bp | 223320 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640562730 |
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| Product | competence/damage-inducible protein CinA |
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| Protein accession | YP_001243832 |
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| Protein GI | 148269372 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1058] Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA
[COG1546] Uncharacterized protein (competence- and mitomycin-induced) |
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| TIGRFAM ID | [TIGR00177] molybdenum cofactor synthesis domain
[TIGR00199] competence/damage-inducible protein CinA C-terminal domain
[TIGR00200] competence/damage-inducible protein CinA N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAG CAGCGATCAT CACTATCGGA AGTGAACTGC TGGAAGGTTT GATACTCAAC
AAAAACGCAC AGTTTCTCTG CCAGGAATTG AAGAATCTGG GATATAGAGT TGTCAAGGTA
TCAACGGTAG GAGATGATTT GATCTCCATC TCAGAAGAAG TGAAAACCCT CCTTCTCAAG
GTCGATCTAC TCATCCTCAC AGGAGGACTC GGCCCCACAC AGGACGATCT CACCCGGGAT
GCAGTCGCAA AAGTGCTGAA CAGGAGTCTC AAACTCAATG AAGAACTCCT CTCGAAGATA
AAAGAGAAGA TAAAAAAATA CCATTCTGAA ATACCGCAGA ACATTGAAAG ACAGGCTTTA
GTAATAGACG GTGCCGAAGT TCTGGACAAC CCTGTGGGAA GTGCTCCAGG ACAACTCCTC
ACTGTGGATG GGAAAATCGT GATTCTCCTG CCGGGACCTC CCAGAGAGCT GATCCCCATG
TTCAACGCAC TGAAAGATCG ATTGAGAACT CCAGATGCCC TGTATCAGGT TGTTTTGAAA
TACTACAGCA TTCCCGAAGC CGTTCTCGAA GATCTTTTGA AAGATATTCT TTACTCCCAG
AACATAGTGG AAGTAGCCAC CATGGCCGAT CATGTAGAAG GAGTACGACT CAGATTGACC
ACCCATATGA AGAACAAAGA ATATCTGGAC GAGATGGTGA AAAAGATTCT CGATAAGACT
GGCGAACACC TCTACGGTGT AAACGACGAA AAGATGGAAG AAGTCGTGGT TAGACTCCTG
AAAGACAGGA AAAAAACGCT CGCCGTTGCA GAATCCTGCA CGGGTGGCAT GCTCTCATCT
TTGGTGGTGA ACGTCCCTGG GGCCTCAGAG GTTTTTGCCG GTGGTGTGGT GGCGTACAGC
AACGATCTGA AAAAACACAT CCTCGGTGTT AGAGAAGACA CTCTCAGAAA ACACGGTGCA
GTGAGCAAAG AATGTGTGCA GGAGATGACG GAGGGTCTTA AAAAACTCAC CGGAGCGGAT
ATCTGTGTCT CCATCTCCGG AATAGCGGGC CCATCAGGTG GTACTCCGGA GAAACCTGTG
GGGACGGTTT TCATAGATAT CTTCGAACAT GAACACATCA CTATGAGGTA TAATTTTACA
GGCGATCGTA ACACGATAAG AACCAGATCC GCCATGATGG CCCTGGAAAA CCTCAGAAAA
TACTTGAAGG GGCGTGAAAA AGTATGA
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| Protein sequence | MKKAAIITIG SELLEGLILN KNAQFLCQEL KNLGYRVVKV STVGDDLISI SEEVKTLLLK
VDLLILTGGL GPTQDDLTRD AVAKVLNRSL KLNEELLSKI KEKIKKYHSE IPQNIERQAL
VIDGAEVLDN PVGSAPGQLL TVDGKIVILL PGPPRELIPM FNALKDRLRT PDALYQVVLK
YYSIPEAVLE DLLKDILYSQ NIVEVATMAD HVEGVRLRLT THMKNKEYLD EMVKKILDKT
GEHLYGVNDE KMEEVVVRLL KDRKKTLAVA ESCTGGMLSS LVVNVPGASE VFAGGVVAYS
NDLKKHILGV REDTLRKHGA VSKECVQEMT EGLKKLTGAD ICVSISGIAG PSGGTPEKPV
GTVFIDIFEH EHITMRYNFT GDRNTIRTRS AMMALENLRK YLKGREKV
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