| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0200 |
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| Symbol | |
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| ID | 5170624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 192842 |
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| End bp | 194986 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640562702 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_001243805 |
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| Protein GI | 148269345 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATCAATC GAACAGAGAT TGAGACAGAA GCGAGAGAAG TAATTAGAGA CCTGGAAAGT
CTCAGAAAAA AGAGCTTCAC AAGAGAGGAG AAAAAACTCC TCACAAAGGC TTATGAGTTT
GCTCGAATCG TTCATGAAGG TCAGAAGAGA TTTTCTGGAG AACCCTTCAT AACCCATCCC
GTTGAGGTCG CAAAAATCCT TGCGGCTCTG GGAGTCGATG TGACGACTCT GGTTGCGGCT
CTTCTGCACG ATGTTGTTGA AGACGGTGAA AATGTCAGCC TCGATCAAAT AAAAAAAGAG
TTTGGGCCTG AATTGGCCAG GATCGTGGAT GGTGTCACAA AAGTCAGCAA TATAAACGCA
CCGATCGGGA GCGATCAAGA CTCTCGAAAA AAGATAGAAA CCATACAGAA AATGTTTCTT
GCAATGGCGG AGGACATGAG AGTTATATTC GTAAAACTCG CCGATCGTCT TCACAACATG
CGCACCATTC ACTACGTTCA GGATCAGGAA AAGAAGAGGT ACAAAGCCTA CGAAACCCTC
GAGATCTACG CACCTCTGGC TCATAAGCTC GGAATCTACT CGATAAAGTC TGAACTCGAA
GACCTGGCTT TCAAGGTGCT GTACCCGGAG GAGTACTACA AGATAAAGGA ACTCGTCGCT
GAGAAGAGAA AAGAGAGAGA AAAGAGAACC AATGAATACA TCTCCCTTCT CAAAAGTGCT
TTGGAAGAGC ACAAGATAAA AGCAATTGTG GAGGGAAGGT ACAAACACTA TTACAGCATA
TGGAAGAAAA TGAAGGAAAA AGAAAAAAAA TTCGAAGAAA TCTACGATTT GATCGCTCTG
AGAGTGATAG TGAAAGACGT GACCACCTGC TACACCGTCC TGGGGATCGT TCACAACATC
TGGAAACCAC TTCCGGGAAG GTTCAAAGAC TACATCGCTG CACCGAAATC GAACGGCTAT
CGTTCACTCC ACACAGCTGT GATAACGGGT TACGGTGAGC CTCTTGAGAT ACAGATAAGA
GACGAGGAGA TGCACAGAGA GGCCGAGTAC GGTTTGATTG CTCACTGGAT ATACAAGGAA
AAACCTGACC TGAAAACAGC GAAAGAATGG ATAGAAAGAC TCCTCGATTG GAGAAAAGAA
CTTGCCCAGG GATTCACCGA ATTTGAGGAT ATCAAGAAAG AGCTCCAGAT GGATGAAGTT
TTTGTTTTCA CCCCGAAAGG AGATATCATC CACCTTCCCA AGGGTTCCAC ACCAATTGAC
TTCGCGTACG CGATACATAC AGAGATAGGG CATCACTACA GTGGAGCAAA GGTGAACGGA
AAGATCGTTC CTATCGACTA TCAGCTGAGA AACGGAGATG TTGTTGAAAT AATCGTCAAC
AAGAACTCTC CAGGTCCAAG TGTTGATTGG CTGAAGTACG CCAAAACCCA CAGCGCGCGA
GCAAAAATCA GAAGGTTTCT GAAGGAAAAA CTCGCGCCCG AACTCGTAGA AAGAGGAAAA
GAAGTTCTCA GAAAGATCTG CCGAAAGCTC GGAAAATCCT TCGAAGAAGT GATGCAAACG
GAAGGAATCA AAAAGTATTT GAACGCGTAC CAGGAAAAAG ATTTCTTCAT GAGAATCGGA
GAAGGTAGTA TTACCACACA AGATCTCATA GAAGCGATTC TGGGAAAAAA GATCGTTGTG
AAAAAGCGTT CCACAAAGAA AAAGGTGAAG ATGCAGAATC TTGTGAAGGT AGATGGAATA
GACAGTATAG AGTTCCACAT TGCGAAGTGT TGTCATCCGA TCATGGGCGA TCCCATAGTG
GCCGTTGTCA GTAAAAGAGG CATGACCATA CACAGAAGGG ATTGTAGAAA CCTGAAGAAC
ATGTCACAGG ACCGAATATT CTCAGCTGAA TGGAACCTTG AAACTTCAGA AATGTTCGAT
GCACACATAA GGGTGGTCCT TGACTCGGAA AAAAACCTTC CGAGTTTGAT AGATCGAATA
ACGAACCTCG GTGCGGAATT TGTGGCCATG AAGACTCTGA AATCAGAAGA ACCACCTGTT
GTGCAAATTC ATATAAAAAT ATCCAACACC ACCGAGCTCT CCGGTCTTCT CGATAGGCTC
AGATCCTACA GATACGTTCT GGACGCGGAA AGGGTGGTGC AATGA
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| Protein sequence | MINRTEIETE AREVIRDLES LRKKSFTREE KKLLTKAYEF ARIVHEGQKR FSGEPFITHP
VEVAKILAAL GVDVTTLVAA LLHDVVEDGE NVSLDQIKKE FGPELARIVD GVTKVSNINA
PIGSDQDSRK KIETIQKMFL AMAEDMRVIF VKLADRLHNM RTIHYVQDQE KKRYKAYETL
EIYAPLAHKL GIYSIKSELE DLAFKVLYPE EYYKIKELVA EKRKEREKRT NEYISLLKSA
LEEHKIKAIV EGRYKHYYSI WKKMKEKEKK FEEIYDLIAL RVIVKDVTTC YTVLGIVHNI
WKPLPGRFKD YIAAPKSNGY RSLHTAVITG YGEPLEIQIR DEEMHREAEY GLIAHWIYKE
KPDLKTAKEW IERLLDWRKE LAQGFTEFED IKKELQMDEV FVFTPKGDII HLPKGSTPID
FAYAIHTEIG HHYSGAKVNG KIVPIDYQLR NGDVVEIIVN KNSPGPSVDW LKYAKTHSAR
AKIRRFLKEK LAPELVERGK EVLRKICRKL GKSFEEVMQT EGIKKYLNAY QEKDFFMRIG
EGSITTQDLI EAILGKKIVV KKRSTKKKVK MQNLVKVDGI DSIEFHIAKC CHPIMGDPIV
AVVSKRGMTI HRRDCRNLKN MSQDRIFSAE WNLETSEMFD AHIRVVLDSE KNLPSLIDRI
TNLGAEFVAM KTLKSEEPPV VQIHIKISNT TELSGLLDRL RSYRYVLDAE RVVQ
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