Gene Tpet_0189 details

Gene Information

• Locus tag: Tpet_0189
• Symbol: thrS
• ID: 5170623
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga petrophila RKU-1
• Kingdom: Bacteria
• Replicon accession: NC_009486
• Strand: +
• Start bp: 182723
• End bp: 184645
• Gene Length: 1923 bp
• Protein Length: 640 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640562691
• Product: threonyl-tRNA synthetase
• Protein accession: YP_001243794
• Protein GI: 148269334
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0441] Threonyl-tRNA synthetase
• TIGRFAM ID: [TIGR00418] threonyl-tRNA synthetase

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.000114049
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGATAA AGGTGAAGCT TCCAGATGGA AAAGAAAAAG AGTACGACAG AGGCATCACA 
CCGGCGGAGA TCGCAAAAGA ACTGGGCGTA AAAAAGGCGA TCGGAGCGGT TGTTAACGGT 
GAACTCTGGG ACCTGAAAAG ACCCATCGAA AATGACTGCG AACTGCGACT TGTAACTCTG 
GAGGATCCCG AGGCACCCGA GTTCTACAGA CACACCATGG CACACATCCT CGCACAGGCT 
GTGATGAGAA TTTATGGAAA AGAAAACGTG AAACTGGGAA TCGGTCCCAC CATAGAGAAC 
GGTTTTTACT ACGACTTCGA CATAAAGAAC GGGAAACTCA CAGAGGAGGA TCTCCCAAAG 
ATAGAACAGG AGATGAAGAA GATAATAAAG GAAAATCTTC CTATAGAAAG AAAGGAGATC 
AGCAAAGAAG AGGCAAGAAA GCTTTTCAAC AATCAGCCTT ACAAACTCGA ACTCATAGAG 
GAGATCGAAG GTGACAGAGT AACGATCTAC CGTCAGGGAG AGTTCGTGGA TCTCTGCAGA 
GGCCCTCATC TTCCTTCGAC TGGAGTAGTG AAGCACTTCA AACTCCTTTC CGTTTCAGGT 
GCGTACTGGC GAGGTAGTGA GAAGAATCCC ATGCTCACAA GAGTTTACGG AACGGCCTTC 
GCTAAAAAGG AAGACCTCGA CAATTACTTG AAGTTCCTTG AAGAAGCGCA GCGGAGGGAC 
CACAGAAAAT TGGGACCTCA CCTCGAACTT TTCATGCTGA ACACCGAATA CGCCCCCGGT 
ATGCCGTTCT TCCTTCCAAA AGGAGTCGTC GTGCTCAACG AATTGATGAG ATTCTCCAGA 
GAACTCCATC GTGAGAGGGG ATATCAGGAA ATCTTCACGC CACTCATAAT GAACGAGCAG 
CTCTGGAAGA TCTCCGGTCA CTGGGATCAC TACGCTGAGA ACATGTACTT CATAGAGAAA 
GACGAGGAAA GGTACGCGGT GAAACCCATG AACTGTCCCG GTCACATTCT CGTGTACAAG 
AGCAGAACTG TTTCCTACAG GGACCTTCCG TTGAGATTCT TCGAGTTCGG CCGGGTTCAC 
AGATACGAGA GAAGTGGAGT TCTCCACGGT CTCATGAGGG TGAGATCCTT CACACAAGAT 
GACGCACATA TATTCTGCAC TCCCGATCAG ATTGAGGAAG AGATACTCGG TGTTCTTGAT 
CTCATAAACA CCATCTACGG TCAGTTCGGT TTCACTTACA GAGTGGAACT CAGCACGATG 
CCCGAAGATC ACATGGGTGA CGAAGCGATT TGGGAGAAGG CAACAACCGC TTTGAAGAAT 
GCCCTGGAGA GGGCCGGACT TTCGTACAAA GTGAACGAGG GCGAAGGGGC ATTTTATGGT 
CCAAAGATAG ACTTTCACAT AAGAGATTCG ATAGGAAGGG AATGGCAATG CGCTACGATT 
CAGCTGGACT TCATGATGCC CGAAAAGTTC AACGTCACCT ACATAGGTCC GGACAACAAA 
GAGCACAGAG CCGTGATGAT ACACAGGGCG ATATACGGTT CGCTCGAAAG GTTCTTTGGC 
ATCCTGATAG AACACTTCGC TGGAGCGTTT CCAACCTGGC TGGCACCGAT CCAGGTGGCA 
GTTATTCCCA TATCAGAAAA ACACAACGAC GGTGCGGAAA AGATTGCAAA AAGGATCTCT 
CAGGAAGGGT TCAGGGTCTT CTTCGATAAC CGCCGTGAAA CTCTTGGATA CCGTATCAGA 
CAGGCTCAAA CCCAGAAAAT ACCGTACATG ATAATATTAG GCGACAAAGA GCTGGAGAGC 
GGAAAGATCT CCGTGAGAAC AAGAACAGGA AAAGAGATAA AAGACGTGGA CCTGGAACAC 
TTTGTTGAAA CCCTGAGAAA CGAAGTTTTG AGCAGAAAGC TCGAACTTTT GATGGAGGGA 
TGA 

 

Protein sequence

MKIKVKLPDG KEKEYDRGIT PAEIAKELGV KKAIGAVVNG ELWDLKRPIE NDCELRLVTL 
EDPEAPEFYR HTMAHILAQA VMRIYGKENV KLGIGPTIEN GFYYDFDIKN GKLTEEDLPK 
IEQEMKKIIK ENLPIERKEI SKEEARKLFN NQPYKLELIE EIEGDRVTIY RQGEFVDLCR 
GPHLPSTGVV KHFKLLSVSG AYWRGSEKNP MLTRVYGTAF AKKEDLDNYL KFLEEAQRRD 
HRKLGPHLEL FMLNTEYAPG MPFFLPKGVV VLNELMRFSR ELHRERGYQE IFTPLIMNEQ 
LWKISGHWDH YAENMYFIEK DEERYAVKPM NCPGHILVYK SRTVSYRDLP LRFFEFGRVH 
RYERSGVLHG LMRVRSFTQD DAHIFCTPDQ IEEEILGVLD LINTIYGQFG FTYRVELSTM 
PEDHMGDEAI WEKATTALKN ALERAGLSYK VNEGEGAFYG PKIDFHIRDS IGREWQCATI 
QLDFMMPEKF NVTYIGPDNK EHRAVMIHRA IYGSLERFFG ILIEHFAGAF PTWLAPIQVA 
VIPISEKHND GAEKIAKRIS QEGFRVFFDN RRETLGYRIR QAQTQKIPYM IILGDKELES 
GKISVRTRTG KEIKDVDLEH FVETLRNEVL SRKLELLMEG