| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0178 |
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| Symbol | |
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| ID | 5170947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 173962 |
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| End bp | 175629 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640562680 |
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| Product | phosphoribulokinase/uridine kinase |
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| Protein accession | YP_001243783 |
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| Protein GI | 148269323 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0572] Uridine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.871097 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAAAGA TCACACTTCG TTCAAAACTG GACGGGAGAG AGATCGTTTT CGAGGAAAAT
CAAAATCTCT TCGATATAGC CAGAGAGTAC CAGAAGTACT ACAGGTACAA AATACTGGCT
GCGAGGGTGA ACAACAGGAT AATAGAACTC TTCAGAACAC CCGATAGAAG CGGAGAACTC
GAATTTTTAG ACCTCACAGA TCCCGACGGA CTCAGAATAT ACCAGAGAGG ACTCGTCTTC
CTCGCAAGTC TCGCCGTGAG AAAACTGAAT TCGGAATGGC GATTGAAGGT CCTTCACTCA
CTCGGGAAGG GGATATACTG CGAAATCTAT AAGGGAAATG AATTAATCGT TCCCGATCAG
AATCAGGTGT TCGCCATAAA AGATAAGATG AGAGAACTCG TCGAGAAAGA TCTGCCTATT
GAGAAGAGAA CGTTCTACAA AGACGAAGCA AGGGAGATAT TAATGAAGGA AGGACTTGTG
AAAACGGTCA ACCTCTTCAA GTACAGAAAG AAGAGAACCG TGAAGCTTTA CCACTGCGAT
GGTTTTTGGG CGTACTTCTA CGGATATCTT CCACCGAGCA CCGGCAGGAT TGACGTTTTC
GATGTTCAGC CCTACAATCA GGGGCTCGTT CTTGTCCATC CGGATCCAAA AACAAGAGAG
CTTCCCGTCA TCCACATGCC CAAACTCTCC CAGGTGTTCC TCGAATACGC CCGATGGCTG
AACGTTCTGG AACTCGAGTA CGTATCCGAT CTCAACGATA TCATAGCCCG TGGGGAAAGG
CACGTGGCTG ACCTTATGCT TCTTTCCGAA GCACTTCATG AAAAGAAGAT CTCAGACATA
GCGGATGAAA TCGCAAAAGA CAAAAGAAAA CGGCTCATTC TGATTGCGGG TCCTTCCTCT
TCGGGAAAGA CCACCTTCGC CAAGAGACTC TCACTCCAGC TCAGAGTGAA CGGTCTAAAA
CCGGTTGCCA TTTCCCTTGA CGACTACTTT GTGGACAGAG AAAAAACACC GCGTGATGAA
AACGGAAACT ACGATTTCGA CTCGATAGAG GCCCTCGACA TAGAACTCTT CAACAGGAAC
CTTCAGGATC TTTTGGCTGG AAAAGAGGTG GTCCTGCCGA AGTTCAACTT CAAGACCGGA
AAGAGAATGA GAGGTCCCAC GCTCAAATTG GAGAAGGACA ACATCATCAT CGTCGAAGGA
ATACACGGTC TGAACGAACG TCTGACGGCC TCAATACCGA AAGAGCAAAA GTTCAAGATA
TACGTGAGTG CATTGACTCA GCTGAACATA GACGATCACA ACAGAGTCAC AACAACGGAC
ACGCGGCTCA TCAGAAGAAT CGTGAGGGAC TACAAGTTCC GGGGACACAC CGCGTACGAT
ACATTGAAGA TGTGGCCAAA CGTCAGAAAG GGTGAAGAAA GAAACATCTT CCCGTTCCAG
GAAGAGGCCG ATGTGATGTT CAACTCGGCC CTGGTTTACG AAATACCAGT GCTCAGGATA
TTCGCTGAAC CGCTTCTCGT TCAAGTTCCG GAAGATGTTC CAGAGTACTC GGAAGCGCTG
AGACTTCTGA AACTTCTGGA CTTCTTCCTT CCGATCACGA ACATAGAAGA TATTCCCGAT
AAATCGATCC TCAGAGAGTT CATAGGAAGG AGTATCTTCA AATATTGA
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| Protein sequence | MRKITLRSKL DGREIVFEEN QNLFDIAREY QKYYRYKILA ARVNNRIIEL FRTPDRSGEL
EFLDLTDPDG LRIYQRGLVF LASLAVRKLN SEWRLKVLHS LGKGIYCEIY KGNELIVPDQ
NQVFAIKDKM RELVEKDLPI EKRTFYKDEA REILMKEGLV KTVNLFKYRK KRTVKLYHCD
GFWAYFYGYL PPSTGRIDVF DVQPYNQGLV LVHPDPKTRE LPVIHMPKLS QVFLEYARWL
NVLELEYVSD LNDIIARGER HVADLMLLSE ALHEKKISDI ADEIAKDKRK RLILIAGPSS
SGKTTFAKRL SLQLRVNGLK PVAISLDDYF VDREKTPRDE NGNYDFDSIE ALDIELFNRN
LQDLLAGKEV VLPKFNFKTG KRMRGPTLKL EKDNIIIVEG IHGLNERLTA SIPKEQKFKI
YVSALTQLNI DDHNRVTTTD TRLIRRIVRD YKFRGHTAYD TLKMWPNVRK GEERNIFPFQ
EEADVMFNSA LVYEIPVLRI FAEPLLVQVP EDVPEYSEAL RLLKLLDFFL PITNIEDIPD
KSILREFIGR SIFKY
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