Gene Tpet_0168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0168 
Symbol 
ID5170386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp160132 
End bp161328 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content46% 
IMG OID640562669 
Productglycosyl transferase, group 1 
Protein accessionYP_001243773 
Protein GI148269313 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00242491 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAACATCG CTATACTCAA TCACTACGCA AGCGTACCAG AGGTGGGAAG CGCCGAAACG 
AGGCATTTTG AACTCGCAAG GCGATTTGTA AGAGAAGGTC ACAGGGTGGA CATCTACGTC
GGAGACTTTT CGCACCTCAC TGGCAAAAGA TGGAGCGAGA TGTTCGGATG GAGCTTTTCT
AAAGACGGTG CGGACTTCAT CGTCGTTGAA ACAAGAGAGT ACATCGGAAA TTCTCTCTCA
AGGCTTCTCT CCTCGATAGA TTATTACAGA AACGGAAGGA AGAAGATCAT TCAGAGTAGA
TACGACGTCA TTATAGCGTC TTCTCCGCAC CCGTTTTCCT GGAGCCTCGG CTGGTATTAC
GTGAAGAAAA AAGGTGGAAG GTTCTTCATC GAGATCAGAG ACGTCTGGCC GGACGATCTT
GTAGAACTTG GTTCTCTGAG CTACCGTCAT CCAGTTTCAA AGCTCTTCGA CCACATGTGC
AAAAAGTATT ATCCGAAAGC AGATGGAATC ATTTCCCTTG TTCCAGATCT TTCCAATCAC
TTCAACAGAC TGAAGGTTCG ACCAAAAAAT TTCATCTACA TTCCCAACGG TGTTGATCTG
AAGATTTTCA AAGATCCAGA ACCGTGCCCG GCGGTGGATG AGCTCTTTTC AAAGGTGCCT
GCCGATAAGA TGAAAGTTGT CTACGCGGGG TCCATCGTCG AACATAAGGG AATAAAAGAG
TTCATAGAAG CACTCTCAAA AGTGAACAAA AACCTGAGAG ATCGTTTTGT GTTTTTCTTT
GTCGGGGCGT CTCAGGCGGA TTATCTTGTT TCTGTGAAAG AAACGGCGAA AGATCTGCAG
AACGTGTTCT TTTTTGATCC TGTTCCAAAA AGGTGTGTTC CCTACCTTCT TCAGAAGGCA
GATGTTCTCC TCTTCACTCT CTCTCAAACC GTGATGGATC ACCCCGCCGT GAGTTCCTAC
AAGGTGGTAG ACTACATGGC CTCTGGAAAA CCAGTCCTCT GTGTCGATAT CGAAAATCTC
CCTTTCAAGA AAACGAAAGG CGCTGTCTTT TTCAGGAAGG ATAACCTCGA GGAGGCATTG
AGAAAGATCC TCCTCGAGGA TCTTTCAGAA CTCGGCAGAA GAAACAGAGA GTATGTGGTG
AAGGAAAGAG ACTGGGGTCG ACTTTACGAA AAGTTAAGGA GTTTCGTACT CTCCTGA
 
Protein sequence
MNIAILNHYA SVPEVGSAET RHFELARRFV REGHRVDIYV GDFSHLTGKR WSEMFGWSFS 
KDGADFIVVE TREYIGNSLS RLLSSIDYYR NGRKKIIQSR YDVIIASSPH PFSWSLGWYY
VKKKGGRFFI EIRDVWPDDL VELGSLSYRH PVSKLFDHMC KKYYPKADGI ISLVPDLSNH
FNRLKVRPKN FIYIPNGVDL KIFKDPEPCP AVDELFSKVP ADKMKVVYAG SIVEHKGIKE
FIEALSKVNK NLRDRFVFFF VGASQADYLV SVKETAKDLQ NVFFFDPVPK RCVPYLLQKA
DVLLFTLSQT VMDHPAVSSY KVVDYMASGK PVLCVDIENL PFKKTKGAVF FRKDNLEEAL
RKILLEDLSE LGRRNREYVV KERDWGRLYE KLRSFVLS