| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0166 |
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| Symbol | rpsB |
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| ID | 5170502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 157903 |
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| End bp | 158685 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640562667 |
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| Product | 30S ribosomal protein S2 |
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| Protein accession | YP_001243771 |
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| Protein GI | 148269311 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0052] Ribosomal protein S2 |
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| TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000940316 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGCGGTTG TTACGATGAA ACAGCTTCTG GAAGCGGGAG TTCACTTTGG ACACAGAACG
AGAAGATGGA ACCCGAAGAT GGCTCCCTAC ATCTACACGG AAAGGAAAGG CATCTACATC
ATCGACCTTC AGAAGACCCA GCAGTTGCTC GAAGAGGCTT ACTACTTCGT AAGGGAGAAA
GCCAGCGAAG GTGCAACGAT TCTCTTTGTT GGGACGAAAA AGCAGGCCCA GGGAGTCATA
AAGGCTGAGG CAGAAAGGTG TGGAGCCTTC TACGTGAACA ACAGATGGCT TGGAGGACTT
TTGACGAACT TCAAAACGAT CAGATCGAGG ATAGAAAAAC TCATCGAACT CGAAGAAATG
GAGCAGAGCG GCAAGCTCGA CGAACTTCCA AAGAAAGAAC AGAGCAGGAT CAGAAGAATT
CTCGAAAAAC TCAGAAAGAA CCTTGGCGGT CTCAAAGAGA TGAGAAAGAT TCCAGACATC
ATCTACATCG TTGATCCAAG GAAAGAAAGA ATCGCTGTGG CAGAGGCGAA CAAGCTGGGA
ATCCCCATCG TGGCTATTGT TGACACGAAC TGCGACCCCG ATCCCATTGA CTACGTTATC
CCTGGAAACG ACGATGCGAT CAGATCCATA AAGCTCATCA CTTCCGTCAT TGCAAATGCG
TATCTCGAGG GAAGAGAGGG AGCTCCTCTC ACCACGGAAG AAGTGGAAAG TTCGGAAGAA
ATGATCGAAG AAATGACAGA GGACTTTAAT CTGGAAGAAT TCGAAGAGGA AGAAGAAGTG
TGA
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| Protein sequence | MAVVTMKQLL EAGVHFGHRT RRWNPKMAPY IYTERKGIYI IDLQKTQQLL EEAYYFVREK
ASEGATILFV GTKKQAQGVI KAEAERCGAF YVNNRWLGGL LTNFKTIRSR IEKLIELEEM
EQSGKLDELP KKEQSRIRRI LEKLRKNLGG LKEMRKIPDI IYIVDPRKER IAVAEANKLG
IPIVAIVDTN CDPDPIDYVI PGNDDAIRSI KLITSVIANA YLEGREGAPL TTEEVESSEE
MIEEMTEDFN LEEFEEEEEV
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