| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0126 |
|---|
| Symbol | |
|---|
| ID | 5171365 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | + |
|---|
| Start bp | 123177 |
|---|
| End bp | 124415 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640562627 |
|---|
| Product | Beta-ketoacyl synthase-like protein |
|---|
| Protein accession | YP_001243731 |
|---|
| Protein GI | 148269271 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
|---|
| TIGRFAM ID | [TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000017098 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAGCGGG TAGTTATCAC GGGTATGGGG ATCGTGAGTC CCTTTGGTGT TGGAAAAGAG
AAAAATTTAG AAGGGCTTAG AGAAACTAAA GTAACGATAG ATCGGATATC TTCTTTTGAC
GCTTCTAACC TTCCTGTCCA GATCGCAGCA GAGGTGAGGG ATTTCAAACC AGAAGAGTAC
ATAAATCCGA AATTAGTCAA AAGAACAGAC CGTTTCGTTC ATTTCGCATT GGCCAGCACG
AAAGAAGCTG TGGAAGACGC CAGTATAAAT TTCGAGCCGT ACGCCGACAG GACGGCCACC
ATCATAGGAT CCGGCATGGG AGGATTTCTG ACGCTCGACA GCGAGAACAA CAAATTCCTG
AGTCAGGGTC CAGGCAGAGT CAGTCCGTTC TTGATTCCGA TGATCCTCAT CGACATGGCT
TCCGGTGTCG TTGCAATGGA ATACGGACTG AAAGGACCGA ACTTCTCTTC TGTGAGCGCC
TGTGCTTCTT CTCTCCACGC GGTGGCTCTC GGTGCTCTCC TCATAAGACA CGGGTACGCG
GATGTGGCAG TCGTCGGGGG AACCGAGGCA ACGATTGCTC CACTTCCCAT CACCGGGTTT
GCCAACATGA GAGCACTCTC AAGGAGGAAC GACGATCCAA AGCGTGCTTC CCGTCCGTTC
GATAAAGACA GAGACGGCTT TGTGATGGGT GAAGGCGGTG CGGTTCTCAT ACTCGAAGCC
GAGGAAGTGG CAAAATCGAG AGGAGCGAAA ATTCTCGCGG AGATCAAGGG AGTGGGTATG
ACGGACGACG CGTACCACTT CAGCGCTCCA GATCCGGAGG GCAGAGGGGC AGCAGAAGCC
ATGAAACTCG CCCTGAAAGA ATCCGGTCTG GCTGTCGAAG ACATCGACTA CGTGAGCTGT
CACGCCACAA GCACACCAGC AGGTGATGAA GCGGAACTCA AAGCGATAAA GAAAGTCCTT
GGAGAACATG TAAAGAACGT CGCCATAAAC TCTTCGAAAG CCCTTATAGG ACATCTCCTT
GGTGCTGCCG GTGCTTCCGA ACTCGTTCTT GCCATCCTTC AGATGCAGAA CTCTTTCGTC
CACGGCATGC CGAACCTTGA CAATCCGATC GACGAAGCGA AAGGAACCGG TCTTGTTGGT
AAAGAGCCCG TTCAGATGGA GATCAAAAAC TTTATAAAGA ACTCCTTCGG TTTTGGCGGG
CACAACGTGT CCATCGTGGT GGGGAGGTAT GAATCATGA
|
|---|
| Protein sequence | MKRVVITGMG IVSPFGVGKE KNLEGLRETK VTIDRISSFD ASNLPVQIAA EVRDFKPEEY
INPKLVKRTD RFVHFALAST KEAVEDASIN FEPYADRTAT IIGSGMGGFL TLDSENNKFL
SQGPGRVSPF LIPMILIDMA SGVVAMEYGL KGPNFSSVSA CASSLHAVAL GALLIRHGYA
DVAVVGGTEA TIAPLPITGF ANMRALSRRN DDPKRASRPF DKDRDGFVMG EGGAVLILEA
EEVAKSRGAK ILAEIKGVGM TDDAYHFSAP DPEGRGAAEA MKLALKESGL AVEDIDYVSC
HATSTPAGDE AELKAIKKVL GEHVKNVAIN SSKALIGHLL GAAGASELVL AILQMQNSFV
HGMPNLDNPI DEAKGTGLVG KEPVQMEIKN FIKNSFGFGG HNVSIVVGRY ES
|
|---|
| |