| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0113 |
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| Symbol | |
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| ID | 5171182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 106638 |
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| End bp | 108032 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640562614 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001243718 |
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| Protein GI | 148269258 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATATT CACTCTTGAA GAGTTACCTT CCAAAGGAAG AAGTACCAGG GATCAGAAAA
GAACTCATAA AATTAGCACT CCCTGCCATG GGAGAAAACG TGCTCCAGAT GCTCTTTGGA
ATGGCAGACA CCGCCTTTTT GGGACATTAC TCATGGAAAG CGATGAGCGG TGTGGGACTC
TCCAACCAGG TATTCTGGGT GGTTCAGGTC GTTCTGATCG CCGCCAGTAT GGGAGCCACC
GTCACGATAG CGAACGCCAT CGGAGCGGGC AACAGGAAAG CTGTGAGGTC CCTTGCCTGG
AACAGTGTCT TTCTCGCCAT ATTCACGGGT GTTATTCTCA CCGCCCTCAC ACCGCTCTCC
GATGTACTGA TAAACATCTT TCCGAATCTG GAAGGAGAAA TAGAATCATC CGCGAAGGAG
TATCTGAAAG TCATCCTTTC CGGTTCCATG GGCTTTTCCA TCATGGCCGT GTTCTCTGCG
ATACTCAGGG GTGCTGGTGA CACAAAAACG CCGATGATCG TCACTGGTCT CACGAACTTT
CTGAACATCT TCCTCGATTA CGCCATGATC TTTGGAAAGT TCGGATTCCC GGAGATGGGG
GTCAGAGGAG CAGCAGTTGC GACGATCCTC TCAAGATTTG TGGGAGCAGC GATCCTCACG
TACGTGATAT TCAAAAGAGA GGAGTTCCAG CTCAGAAAAG GGTTTGTTCC TCCCAAGTGG
TCCAGTCAAA AAGAAATTCT CCGTGTTGGA TTTCCAACTG CCATAGAGAA CTTCGTTTTT
TCCACAGGTG TTTTGATGTT TGCGAACATC CTGCTCATCG CAGGAGCTGA AGCGTACGCT
GGACACAGAA TAGGTATAAA CGTCGAGTCT CTATCTTTCA TGCCCGCGTT TGGAATCTCG
GTCGCTATCA CCACACTGGT TGGAAGGTAC AACGGAATGG GAAACAAGGA ACACGTTCTT
GGAGTCATTC GACAGGGATG GATCCTGAGT CTTCTGTTTC AGGTGACGGT TGGTATTATA
ATCTTTCTTT TTCCAGAGCC ACTGATACGC ATCTTCACCA GTGATCCACA GATAATAGAG
ATCTCAAAAC TCCCCGTCAA GATAATTGGA CTCTTCCAAT TTTTCCTCGC AATAGATTCA
ACCATGAACG GTGCCCTCAG GGGGACGGGA AACACCCTTC CACCGATGAT CATCACCTTC
ATCTCCATCT GGACCGTGAG GCTTCCCGTC GCCTTCGTGA TGGTGAAGTA CTTCCAGCTT
GGGCTTCTCG GTGCCTGGAT CGGAATGATC GCAGACATCA TCTTTCGAAG TACACTGAAG
CTCCTCTTCT TCCTCTCCGG CAAGTGGGAA AAGAGAGCCG TCCTCACACG GGAGAGAGTG
AAAGAGTTGG GATAA
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| Protein sequence | MKYSLLKSYL PKEEVPGIRK ELIKLALPAM GENVLQMLFG MADTAFLGHY SWKAMSGVGL
SNQVFWVVQV VLIAASMGAT VTIANAIGAG NRKAVRSLAW NSVFLAIFTG VILTALTPLS
DVLINIFPNL EGEIESSAKE YLKVILSGSM GFSIMAVFSA ILRGAGDTKT PMIVTGLTNF
LNIFLDYAMI FGKFGFPEMG VRGAAVATIL SRFVGAAILT YVIFKREEFQ LRKGFVPPKW
SSQKEILRVG FPTAIENFVF STGVLMFANI LLIAGAEAYA GHRIGINVES LSFMPAFGIS
VAITTLVGRY NGMGNKEHVL GVIRQGWILS LLFQVTVGII IFLFPEPLIR IFTSDPQIIE
ISKLPVKIIG LFQFFLAIDS TMNGALRGTG NTLPPMIITF ISIWTVRLPV AFVMVKYFQL
GLLGAWIGMI ADIIFRSTLK LLFFLSGKWE KRAVLTRERV KELG
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