Gene Tpet_0109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0109 
Symbol 
ID5171141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp102140 
End bp102871 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content46% 
IMG OID640562609 
ProductWecB/TagA/CpsF family glycosyl transferase 
Protein accessionYP_001243714 
Protein GI148269254 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1922] Teichoic acid biosynthesis proteins 
TIGRFAM ID[TIGR00696] bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0905538 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAGAGA TCGAACTTTT CGGAACGAAA GTTCTATCGG GGACAAGGCG GGAATTCCTG 
AACGCGATCG AGGAGAGGAT AGAGAAAGAC ATTAAAACCT TCGTTGTCAC CATGAACGCT
TCGATTCTTT TGAAAGCCAT AGAAGATGCA GGATATAGAG CTATCGTGAA CTCTGCGGAC
CTCGTTGTAC CCGATGGTTT CGGTGTTGTC TGGGCTATGA AAACTCTCAC AGGGGAGACG
ACTGAAAGGT TGCCTGGAAT AGAGATCATG AAACACCTCT GTGAAAGATC GAAAGAAAAA
GGCTGGAAGG TGTATCTTCT CGGAACGAAA AGGGAAATCG TTGAGAAGGC AAAACAAGTA
CTGGAGAGAT CGGGTGTGAG AGTTGTGGGC TGTCACGACG GTTTCTTCTC CGAAAAAGAA
TCACCGAAAA TCGTTGAAGA TATAAACAGA AGTTCAACCG ATCTTCTCTT TGTCGGGATG
GGTGTTCCCC GTCAGGAGGA GTGGATATAT AGGAACTTTC CACAGCTGAA CGTGAAGCTC
GCCATGGGTG TTGGAGGATC CATAGACGTC GTATCGGGCA AAAAGAAACG CGCACCGGAA
TGGGTTCAGA GGATGAACCT GGAGTGGCTT TACAGGTTTT TCCAGTCTCC TTTGAGTAAA
AGAAAGGTAC CGGTGCAGGT TTCAAAGTTC GTCTTTTTCG TTTTGAGAGA AAAATTGAAA
AACAGAAACT GA
 
Protein sequence
MKEIELFGTK VLSGTRREFL NAIEERIEKD IKTFVVTMNA SILLKAIEDA GYRAIVNSAD 
LVVPDGFGVV WAMKTLTGET TERLPGIEIM KHLCERSKEK GWKVYLLGTK REIVEKAKQV
LERSGVRVVG CHDGFFSEKE SPKIVEDINR SSTDLLFVGM GVPRQEEWIY RNFPQLNVKL
AMGVGGSIDV VSGKKKRAPE WVQRMNLEWL YRFFQSPLSK RKVPVQVSKF VFFVLREKLK
NRN