| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0105 |
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| Symbol | pheT |
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| ID | 5170320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 96155 |
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| End bp | 98521 |
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| Gene Length | 2367 bp |
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| Protein Length | 788 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640562604 |
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| Product | phenylalanyl-tRNA synthetase subunit beta |
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| Protein accession | YP_001243710 |
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| Protein GI | 148269250 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
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| TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000297974 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGAGTTC CCGAGTCTTG GCTCAGAGAA TTCGTAGATC TCGACTGGGA CATCGAGCAA
ATAGCGGAAA GACTCACTTT TTCTGGCACG AGTGTGGAGG ATATTCTGAG ACCTTTCAAC
GTTTCCGGAG AGATAATCAC AGCGAGGGTG ATAGAAAGGT TCGATCATCC CGCCTCAGAA
AAGCTCATCG TGTGCAAGGT GGACACCGGA AAGAGAATCT ACACGGTCAT CACAGCCGAT
AAAACCGTGA ACGAAGGAGA CTACGTCATA CTGGCTCTCG AAGGAGCTAC CTTGAACAAC
GGTCTCAAGA TAGAGCCTCG TGAGTTCAAA GGGGTTATCT CGGAGGGTAT GCTTTGCTCA
CTTGAAGAAT TGGGACTTGA GGAAAAATCC GACAGAGTTT ATCGTTTCCC TGATCCCGTG
GAGCTCGGTG TGAACGTGGT AGAGGAATAT GGACTCAACG AAAGAGTCCT GGACATAGAG
ATAACTCCAA ACAGGCCTGA TTGTCTTTCG ATTATTGGTG TTGCGAGAGA GCTTTCTGCC
CTCAGCGGAA GGCCTTTGAA TAAGCCTCAA CCCGATGTTT CTTTTGTGGA TGAAGATGTT
CAGTTCGATG TGGAGATAGA AGACGTGGAG GGTTGTCCCA GATACTCTGC TCGAATAATG
AAAGGTGTCA CCGTGAAGGA TTCGCCGCTC TGGATGAAGG CGAGGCTCGT AGCGGCAGGG
GTTCGTTCTC TGAACAACGT GGTCGACGCC ACGAACTACG TGATGATCGA GCTGGGACAT
CCCGTTCACG CGTTCGATCT GAACAGGCTC AAAAACAAGA TAATCGTTGT GAAATCTGCA
AAGGGTGGAG AAAGAGTCCT GCTACTCGAT GAAAAGGAGT ACAAACTGAA GGGCGGAGAG
ATCTTGATAA CGGACGGTGA GAACGTCCTC GCACTTGGCG GAATCATGGG AGGAATGGAA
TCTGGTGTGT ACGATGACAC CAGAGATCTG GTGCTGGAAG TGGCTTACTT CGATCCTGTG
AGGATAAGAA AGGCATCCAA AGCGCTTGGA ATCAGTTCTG AGTCTTCTTA CAGGTTCGAA
CGAGGTGTGG ATCCGAACGA TGTGGAACTT GTGTCTTTGA GGCTTGCAGA ATTGATTCAA
AAGCTGGCCG GCGGTCATGT TCTTGGGAAA TTCTGGGATG TTTATCCTCG AAAGATAGAA
TCCAAAAAGG TGATGCTCAG AAAAGCCAGA ATCGAAAAGA TACTGGGAAC GAAAGTTGAA
GAGCCGGGCA ATATTCTCAA ACGCCTTGAA TTCCAGGTGG AGGACAGAGG AGACAGTTAC
GAAGTTCTTG TTCCCACCTT CAGACCGGAC GTTGAAAGGG AGATAGACCT CATAGAAGAG
ATAGGAAGGA TTTACGGGTA CGAGAAAGTC GAATCGAAGG TGATAAGCGT TCCTGCAATA
AACCGTGGCT GGGACGAGAA ACAGCTCTTC AGAAGGGAAA TTTCTCAATT CATGAAAGGA
ATGGGTTTCG ATGAAGTGGT GACTTTCTCT TTTGTGGATT CCCAGAAGGT TAAAAGATGG
CCTCTGGTGG GCAGAGAACC CATAACTCTC TCCAATCCTA TCGTTTCAGA TATGGACGTG
ATGAGAACGT CACAATTTTA CAGCCTGATA CAGGTGCTCG CTGAGAATTT CAAGAGGCAG
AACAGGGATC TGAAACTCTT CGAAATTGGA AAGGTTTACT TCAAGGAGAA CGGAAACTTC
ATGGAGATAG AGACGCTCTC TGCGATGAGC TGTGGTTTGG AAAATCCGGG AGACTACACC
GATAAAAGAA ACGTGTCCTT CTACACGACC AAAGGAATTC TCGATGAACT CTTCTTCAGG
TTCGGTGTGA ATGTCGAATA CAGAGTCGCG GAGATACCTG GATTGTTCCC GACTAGATCC
GCTCGCATCT ACGTGGAAAA CAGGGAGATC GGTTTCATTG GAATGGTTGA TCCAAAGCTC
CTCGATGAGT ACGATGTGAA AGAAGACACC TACTTCTTCG AGATAGACAT GGAACTTCTG
AGAGAATGTG CATCGAAGAG ACCTGCTTAC AGGCCCACAC CAAAATTTCC TGCTGTGAGA
AGAGATATCT CCTTCCTGCT TCCGAAGGGA TTCGAGTCTG TGAAGATCAT CGAACTTTTC
AAAAAGAGCG GAGGAGATCT GGTGGAGGAA GTGGGAGTGT TTGATGTCTA TGAAGGAAGA
GGAATCCCGG AGGATATGGT GAGTGTTACA TTCTATGTGG TGTTCAGGCA CCCGGAAAGA
ACTCTGACCG ACGAAGAAGT GAACAGAATT TTCGAAGAGA TGGTACAGAA AACGGAAGAG
GAGTTTGGAA TAAGAAGAAG ATTCTGA
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| Protein sequence | MRVPESWLRE FVDLDWDIEQ IAERLTFSGT SVEDILRPFN VSGEIITARV IERFDHPASE
KLIVCKVDTG KRIYTVITAD KTVNEGDYVI LALEGATLNN GLKIEPREFK GVISEGMLCS
LEELGLEEKS DRVYRFPDPV ELGVNVVEEY GLNERVLDIE ITPNRPDCLS IIGVARELSA
LSGRPLNKPQ PDVSFVDEDV QFDVEIEDVE GCPRYSARIM KGVTVKDSPL WMKARLVAAG
VRSLNNVVDA TNYVMIELGH PVHAFDLNRL KNKIIVVKSA KGGERVLLLD EKEYKLKGGE
ILITDGENVL ALGGIMGGME SGVYDDTRDL VLEVAYFDPV RIRKASKALG ISSESSYRFE
RGVDPNDVEL VSLRLAELIQ KLAGGHVLGK FWDVYPRKIE SKKVMLRKAR IEKILGTKVE
EPGNILKRLE FQVEDRGDSY EVLVPTFRPD VEREIDLIEE IGRIYGYEKV ESKVISVPAI
NRGWDEKQLF RREISQFMKG MGFDEVVTFS FVDSQKVKRW PLVGREPITL SNPIVSDMDV
MRTSQFYSLI QVLAENFKRQ NRDLKLFEIG KVYFKENGNF MEIETLSAMS CGLENPGDYT
DKRNVSFYTT KGILDELFFR FGVNVEYRVA EIPGLFPTRS ARIYVENREI GFIGMVDPKL
LDEYDVKEDT YFFEIDMELL RECASKRPAY RPTPKFPAVR RDISFLLPKG FESVKIIELF
KKSGGDLVEE VGVFDVYEGR GIPEDMVSVT FYVVFRHPER TLTDEEVNRI FEEMVQKTEE
EFGIRRRF
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