Gene Tpet_0094 details

Gene Information

• Locus tag: Tpet_0094
• ID: 5170639
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga petrophila RKU-1
• Kingdom: Bacteria
• Replicon accession: NC_009486
• Strand: -
• Start bp: 86358
• End bp: 88268
• Gene Length: 1911 bp
• Protein Length: 636 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640562593
• Product: DNA gyrase, B subunit
• Protein accession: YP_001243699
• Protein GI: 148269239
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
• TIGRFAM ID: [TIGR01059] DNA gyrase, B subunit

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.000000363706
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAAGT ACTCCGCTGA AAGTATAAAG GTTTTGAAGG GGCTGGAACC TGTCCGAATG 
CGACCCGGAA TGTACGTAGG ATCCACAGGA AAGCGTGGAT TGCATCACCT CGTGTACGAA 
GTGGTGGACA ACAGTGTTGA CGAGGCACTG GCAGGATACT GTGACTGGAT ACGTGTGACT 
CTCCATGAAG ATGGAAGTGT GGAAGTCGAG GATAACGGGA GAGGAATACC CGTTGATATA 
CATCCCGAAG AAGGAAGAAG CGCTCTGGAA GTGGTTTTCA CGGTTCTTCA TGCAGGAGGG 
AAGTTTTCCA AGGACTCTTA CAAGATAAGT GGCGGTTTGC ATGGTGTTGG TGTATCGGTG 
GTGAACGCTC TTTCGGAGTG GTTGGAGGTG CGGGTGCATC GTGATGGGAA GATTTATCGG 
CAGCGATATG AAAGAGGTAA ACCGGTCACA CCTGTGGAAG TAATAGGAGA GACCGATAAG 
CACGGCACGA TCGTTCGATT CAAACCCGAC CCTCTCATAT TCTCAGAAAC GGAATTCGAT 
CCTGACGTAC TGGAACACAG GTTGAGAGAG ATAGCTTTCC TAGTACCAGG ACTCAAAATA 
GAATTCGAAG ACAGAATAAA CGGAGAGAAG AAAACCTTCA AATTCGACGG AGGCATAGTG 
GAGTATGTGA AGTATTTGAA CCGTGGGAAA AAAGCTCTAC ACGATGTGAT ACACATAAAG 
AGAACGGAAA AAGTGAAAAC AAAAAATGGT GAAGACGAAG TGATAGTGGA GATCGCCTTT 
CAATACACTG ATTCGTATTC TGAAGATATC GTGTCTTTTG CAAACACCAT AAAAACTGTC 
GATGGTGGAA CTCATGTTAC AGCCTTTAAG AGCACCCTCA CAAGACTCAT GAACGAGTAT 
GGGAAAAAAC ATAATTTTCT CAAGAAAGAC GATTCCTTCC AGGGTGAAGA TGTGAGAGAA 
GGTCTCACTG CGGTTATCAG TGTTTACGTG AAAAACCCCG AATTTGAAGG ACAAACAAAG 
TCAAAACTCG GCAACGAAGA AGTCAAGGAA GCGGTAACCA AGGCTATGAG AGAAGAGCTG 
AAAAAAATAT TCGACGCAAA TTCCGATCTT GTGAAAGCTA TTCTTTCAAA GATCATGAGT 
ACCAAACAAG CAAGAGAAGC GGCAAAAAGA GCTCGAGAGA TGGTGAGGAG GAAAAACGTT 
CTTCAAAACA CAGCACTTCC GGGGAAACTG GCGGACTGCA GTTCCACACA TAGAGAGAAA 
ACGGAGCTTT TCATCGTGGA AGGTGACTCT GCTGGTGGAT CTGCAAAGCA GGCCAGAGAC 
AGAGAATTTC AAGCGGTTCT TCCCATAAGA GGAAAGATTT TGAACGTGGA AAAATCATCC 
CTCGATAGAT TACTGAAAAA CGAGCAGATC AGTGACATAA TTGTTGCAGT GGGAACGGGC 
ATAGGAGATG ATTTCGACGA AAGCAAGCTC AGATACGGTA GGATTATCAT CATGACCGAC 
GCCGATATAG ACGGTGCACA CATAAGAACT CTCCTTCTGA CACTCTTCTA TAGATACATG 
AGACCCCTCA TCGAACAGGG CAGGGTATAC ATAGCACTCC CACCTCTCTA CAGGATCAAA 
GCTGGAAGAG AAGAGTTCTA CGTTTACAGT GACCAGGAGC TGGCGGAATA CAAAGAGAAA 
CTCCAGGGAA AAAGGATCGA AATTCAACGG TACAAAGGAC TTGGTGAGAT GAATCCTGAG 
CAGCTCTGGG AAACAACGAT GAATCCAGAA ACGAGAAAAA TCATAAGGGT AACTATAGAA 
GATGCCGAAG AAGCGGATAG ACTCTTTGAA ATTCTCATGG GTAACGATCC ATCCAGCAGA 
AGGGAGTTCA TAGAAAGGCA CGCTCTGAAA GTGAAAGAAC TGGATATCTG A 

 

Protein sequence

MEKYSAESIK VLKGLEPVRM RPGMYVGSTG KRGLHHLVYE VVDNSVDEAL AGYCDWIRVT 
LHEDGSVEVE DNGRGIPVDI HPEEGRSALE VVFTVLHAGG KFSKDSYKIS GGLHGVGVSV 
VNALSEWLEV RVHRDGKIYR QRYERGKPVT PVEVIGETDK HGTIVRFKPD PLIFSETEFD 
PDVLEHRLRE IAFLVPGLKI EFEDRINGEK KTFKFDGGIV EYVKYLNRGK KALHDVIHIK 
RTEKVKTKNG EDEVIVEIAF QYTDSYSEDI VSFANTIKTV DGGTHVTAFK STLTRLMNEY 
GKKHNFLKKD DSFQGEDVRE GLTAVISVYV KNPEFEGQTK SKLGNEEVKE AVTKAMREEL 
KKIFDANSDL VKAILSKIMS TKQAREAAKR AREMVRRKNV LQNTALPGKL ADCSSTHREK 
TELFIVEGDS AGGSAKQARD REFQAVLPIR GKILNVEKSS LDRLLKNEQI SDIIVAVGTG 
IGDDFDESKL RYGRIIIMTD ADIDGAHIRT LLLTLFYRYM RPLIEQGRVY IALPPLYRIK 
AGREEFYVYS DQELAEYKEK LQGKRIEIQR YKGLGEMNPE QLWETTMNPE TRKIIRVTIE 
DAEEADRLFE ILMGNDPSSR REFIERHALK VKELDI