| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0079 |
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| Symbol | |
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| ID | 5169940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 71533 |
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| End bp | 72624 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640562578 |
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| Product | GTP-binding protein, HSR1-related |
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| Protein accession | YP_001243684 |
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| Protein GI | 148269224 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1161] Predicted GTPases |
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| TIGRFAM ID | [TIGR03597] ribosome biogenesis GTPase YqeH |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000212587 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGTGTC CCGGATGCGG AGCAGCCATT CAGTTTGAGG ATCCAAAAAA ACCAGGGTAC
ATCCCGCGTG AGGTCTACGA AAGAAGGCTC GAAGAAGGAA GAGAAATACT CTGTCAAAGA
TGCTTTCGGA TGAAACATTA CGGCAAACTG GAGCCAGTCG AATTCAATTG GGATTTCAAA
AACCAGTTGA AATCGTACCT TGGAGGATTC GATGTTGTGG TCTGGGTGAT CGATATTTTC
GATTTCGAGG GAACTTACAG AGAGGATATA GCAGAAATTT TGAAGGGGAA GAGGGTTATC
TACGCCATAA ACAAGGTCGA TCTCCTGCCA AGGGTGGTTA CAGTGAAGGA AATCAAAGAA
TGGGTGAAGA AAAGGATAAG AGTACACAAT CCGGATGACA TAAGGATCGT CAGTGCTGAA
AAAAGTTTTG GTCTGAGCTC GCTTGTGAAG TATCTTTCAC TGTTGACCGA CAAGGCGCTG
GTGGTGGGAG TAACGAACGT TGGAAAATCT TCTCTGATGA ACAAGATCTG TACCCATGAG
AACACCATAA GTCCCTTCCC GGGGACAACT CTGGGTATTC TCAGAAGAAA GGTAAGAGAA
GCGAATCTGT ATCTCTACGA TACCCCAGGT ATCATGACAA ACGATAGAAT TCTCGATCTT
CTGGATTCTG AATGTCAAAA AAGAGTTTTA CCAAGAGAAG AGCTCTCCAG GAAAACCTTC
AAGCCGGATA ATGGAAGAAC CATCTTCATG GGGGGACTGT GCCGATTCGA TATCCATTTT
GAAACAGAAA AGAATCCGAT CTTTCTGCTT TTCTCCTCTA AAGAAGTAAC CTTCCATGAA
ACGAAGAGGG AAAGAGCAGA TGAGCTCATG AGAAACAGAC TGGGAGATCT GTTGATTCCT
CCGTGTTCCA AAACAGAATT TGAAAACTTC AAGTGGAAGA GAGAAATTTT CACATTAAAA
GAAGGAGAAG AACTGGCGGT GGCAGGACTG GGATGGATGA GTGTCCGAAG AGGCCCTTTC
ACCGTCGAAG TCACGGTTCC AGATAACGTT AAGCTTGTTG TAAGAGAAGC ACTCGTCAAT
CCCAAACGTT AA
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| Protein sequence | MKCPGCGAAI QFEDPKKPGY IPREVYERRL EEGREILCQR CFRMKHYGKL EPVEFNWDFK
NQLKSYLGGF DVVVWVIDIF DFEGTYREDI AEILKGKRVI YAINKVDLLP RVVTVKEIKE
WVKKRIRVHN PDDIRIVSAE KSFGLSSLVK YLSLLTDKAL VVGVTNVGKS SLMNKICTHE
NTISPFPGTT LGILRRKVRE ANLYLYDTPG IMTNDRILDL LDSECQKRVL PREELSRKTF
KPDNGRTIFM GGLCRFDIHF ETEKNPIFLL FSSKEVTFHE TKRERADELM RNRLGDLLIP
PCSKTEFENF KWKREIFTLK EGEELAVAGL GWMSVRRGPF TVEVTVPDNV KLVVREALVN
PKR
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