Gene Tpet_0077 details

Gene Information

• Locus tag: Tpet_0077
• ID: 5170202
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga petrophila RKU-1
• Kingdom: Bacteria
• Replicon accession: NC_009486
• Strand: +
• Start bp: 69902
• End bp: 70420
• Gene Length: 519 bp
• Protein Length: 172 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 640562576
• Product: GrpE protein
• Protein accession: YP_001243682
• Protein GI: 148269222
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0576] Molecular chaperone GrpE (heat shock protein)

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.00000749846
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTGAAA AGGACAAAAA GGAACTCACA CAGGAATGTG AAGAACTGAA AGAAAAATAT 
AAAGAACTGG AAGAGTACGC AAAAAGACTG AAGGCCGAAT ACGAAAACTA CCGCGAGGAA 
GTCGCCCGTG AAAAAAGAGA ACTGATAAAG AACGCAAACG AATACCTCAT ATTGAAACTC 
ATTCCCGTTC TTGATGATTT CGAAAGGGCA TTGAATCAAG GGGAAAAGAG AGACGCCTTC 
TATGAAGGCG TGAAAATGAT ATACAAAAAA CTCCTGAACG TCTTGGAAAA AGAAGGACTC 
ACAAAGATCC ACGTAGGAGA GAAATTCGAT CCCTTTGAAC ACGAAGCAGT TGAAAGAGTG 
GAAACGGAAG ATGTGGAAGA GTACACCGTC CTCGAGGTAG TAGAGAGTGG TTACAAATTC 
CACGGGAAAG TCCTGAAACC CGCAAAAGTG AAGGTTGCAG TGAAACCACG AAAGAAGGAA 
GCAGAGAAGG TTGAAAAACC TTCTGACGAG AAGGAGTGA 

 

Protein sequence

MSEKDKKELT QECEELKEKY KELEEYAKRL KAEYENYREE VAREKRELIK NANEYLILKL 
IPVLDDFERA LNQGEKRDAF YEGVKMIYKK LLNVLEKEGL TKIHVGEKFD PFEHEAVERV 
ETEDVEEYTV LEVVESGYKF HGKVLKPAKV KVAVKPRKKE AEKVEKPSDE KE