| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0071 |
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| Symbol | |
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| ID | 5170641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 63953 |
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| End bp | 64882 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640562569 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_001243676 |
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| Protein GI | 148269216 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGCACG GAATCCTTGT AGCCTACAAA CCTAAAGGAC CCACATCGCA CGATGTTGTG
GACGAAGTGA GAAAAAAATT GAAGACGAGG AAAGTCGGAC ACGGTGGAAC TCTCGATCCG
TTCGCCTGTG GTGTTCTCAT AATCGGTGTC AACCAAGGTA CGAGAATTCT TGAGTTCTAC
AAAGATTTGA AAAAGGTGTA CTGGGTGAAG ATGAGGCTCG GTTTGATAAC TGAGACCTTC
GATATAACAG GCGAAGTTGT TGAGGAACGA GAATGCAATG CCACCGAAGA AGAAATAAGA
GAAGCAATCT TTTCCTTTGT GGGAGAATAC GACCAGGTTC CGCCCGCTTA TTCTGCCAAG
AAACACAAAG GCGAACGTCT CTACAAACTG GCGAGAGAGG GAAAGATCAT AAATCTTCCT
CCAAAGCGAG TGAAGATCTT CAAGATATGG GATGTGAATG TTGAGGGGAG AGACGTCTCT
TTCAGAGCGG AAGTGTCTCC CGGCACCTAC ATAAGATCTC TCTGTATGGA TATAGGTTAC
AAGCTCGGCT GTGGTGCCAC CGCCGTTGAG CTCGTACGAG AGAGCGTGGG ATCTTATACA
ATTGAGGAAA GTTTGAACGT ATTCGAAGCC GCTCCTGAAG AGATTGAAAA CAGGATCATA
CCACTCGAAA AATGCCTTGA GTGGCTGCCG CGTGTTGTCG TTCATCAGGA ATCAACGAAA
ACGATTCTCA ACGGTTCTCA AATACACCTT GAGATGCTCA AAGAATGGGA CGGTTTCAAA
AAGGGGGAAG TTGTCAGAGT ATTCAACGAA GAAGGACGGT TACTTGCTCT GGCTGAAGCG
GAAAGAAATT CTTCTTTTCT GGAAACCTTG AGAAAGCACG AAAGAAACGA GCGAGTTTTG
ACTCTCAGAA AGGTCTTTAA CACGAGGTGA
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| Protein sequence | MKHGILVAYK PKGPTSHDVV DEVRKKLKTR KVGHGGTLDP FACGVLIIGV NQGTRILEFY
KDLKKVYWVK MRLGLITETF DITGEVVEER ECNATEEEIR EAIFSFVGEY DQVPPAYSAK
KHKGERLYKL AREGKIINLP PKRVKIFKIW DVNVEGRDVS FRAEVSPGTY IRSLCMDIGY
KLGCGATAVE LVRESVGSYT IEESLNVFEA APEEIENRII PLEKCLEWLP RVVVHQESTK
TILNGSQIHL EMLKEWDGFK KGEVVRVFNE EGRLLALAEA ERNSSFLETL RKHERNERVL
TLRKVFNTR
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