Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0062 |
Symbol | |
ID | 5170230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 57039 |
End bp | 57461 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640562560 |
Product | hypothetical protein |
Protein accession | YP_001243667 |
Protein GI | 148269207 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1585] Membrane protein implicated in regulation of membrane protease activity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.351134 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGCCT GGGTGTTCTG GCTTGTTCTC GGTGTGATCC TTATGGTTGC GGAAATTCTC ACACCTACAT TCTTCATATT CTGGTTTGGA GTGGGCGCCC TTGCCGCTTC TCTGGTGTCA CTTTATCTTG GAGTATATGT TCAAATCATA GTCTTTGCAG CTGTATCTAT AGTACTCGTC TTTTTCACGA GAAGGCTGGT TCAGAACTGG GAATCTCCGA GAAAGATCCA TGTTGAAGAG ATCGCTGGAA AGGTGGCTCT CGTCATTGAG ACAATAGACA ACAGAAAGGG AACTGGCCTT GTGAAGATCG ATGGAGATGT GTGGAGGGCG TACGCGGAAG ACGACGATGA GGTCATAGAG AAAGGAGAAC ACGTGAAGAT AATGAAGGTG GAAGGTGCCC ATGTGGTTGT AAAAAGAGTA TGA
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Protein sequence | MEAWVFWLVL GVILMVAEIL TPTFFIFWFG VGALAASLVS LYLGVYVQII VFAAVSIVLV FFTRRLVQNW ESPRKIHVEE IAGKVALVIE TIDNRKGTGL VKIDGDVWRA YAEDDDEVIE KGEHVKIMKV EGAHVVVKRV
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