Gene Tpet_0062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0062 
Symbol 
ID5170230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp57039 
End bp57461 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content47% 
IMG OID640562560 
Producthypothetical protein 
Protein accessionYP_001243667 
Protein GI148269207 
COG category[U] Intracellular trafficking, secretion, and vesicular transport
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1585] Membrane protein implicated in regulation of membrane protease activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.351134 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGCCT GGGTGTTCTG GCTTGTTCTC GGTGTGATCC TTATGGTTGC GGAAATTCTC 
ACACCTACAT TCTTCATATT CTGGTTTGGA GTGGGCGCCC TTGCCGCTTC TCTGGTGTCA
CTTTATCTTG GAGTATATGT TCAAATCATA GTCTTTGCAG CTGTATCTAT AGTACTCGTC
TTTTTCACGA GAAGGCTGGT TCAGAACTGG GAATCTCCGA GAAAGATCCA TGTTGAAGAG
ATCGCTGGAA AGGTGGCTCT CGTCATTGAG ACAATAGACA ACAGAAAGGG AACTGGCCTT
GTGAAGATCG ATGGAGATGT GTGGAGGGCG TACGCGGAAG ACGACGATGA GGTCATAGAG
AAAGGAGAAC ACGTGAAGAT AATGAAGGTG GAAGGTGCCC ATGTGGTTGT AAAAAGAGTA
TGA
 
Protein sequence
MEAWVFWLVL GVILMVAEIL TPTFFIFWFG VGALAASLVS LYLGVYVQII VFAAVSIVLV 
FFTRRLVQNW ESPRKIHVEE IAGKVALVIE TIDNRKGTGL VKIDGDVWRA YAEDDDEVIE
KGEHVKIMKV EGAHVVVKRV