Gene Tpet_0054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0054 
Symbol 
ID5170024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp48436 
End bp50814 
Gene Length2379 bp 
Protein Length792 aa 
Translation table11 
GC content47% 
IMG OID640562552 
ProductATPase 
Protein accessionYP_001243659 
Protein GI148269199 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0542] ATPases with chaperone activity, ATP-binding subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000145392 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAACC TGAACGACAA GATGAAGGAT ATTTTCGAAA GGAGTGTGGA GGATATCAAA 
GAAAGAAATC AGAACCTGCT CAGACCAGAA CACATTCTCC TTCAGATTCT TTACGATGAA
AACGAGGCCA CGAAGGTACT GAAAGATCTC AATGTAAACG TGGAAGAAGT GATTACTGAG
CTGGAGGACT ACATCGATTC CCAGTACGGG ATATACTACG GATTCTCCGA TCAGGTCTAT
GTATCGAAAG AGCTTTCTTA CATCCTGGAG CTGGCGAGAA AGGAAGCCAG ACTCTTCAAG
CAGAGGGATG TAGGTCCTCT TCACTTCCTT CTAGGACTGT TGAGAGACGG TTCCACGCAC
GCTGCCCGTG TCCTGAAAAA GTACGGCGTT GACTACGAAA AAGTGCTTCA GAAGATTAGG
GAGCACGAAG AAGAGTACGC GACCGAACAG TCACCGCTCA CGGCTTTTGC AACCGATCTC
ACAAAATTGG CAAAAGAGGG GAAAGTAGGC CCTATCATAG GAAGGGACAA AGAAATCGAG
CGCGTGATTG AAATTCTCAT GAGAAAAACC AAGAACAACC CAATTCTAAT CGGTGATCCA
GGTGTTGGAA AAACCGCTAT TGTGGAAGGT CTCACACAGA GAATCGTTGA GGGGAAAGTC
CCTGATCCTC TAAAAGATGT GCGCATACTG ATGGTGGATC TCGGAAGGAT GATAGCGGGA
ACCAAGTACA GGGGAGAGTT TGAAGAAAGG CTGAAATCGT TCCTCGATGA AGTGATGAAA
CAGAAAGAAA AAACGATTCT CTTCATCGAT GAAATACACA CCCTGGTTGG TGCTGGCGCA
GCCGAGGGAG CGATGGACGC TGCCAACATG TTGAAGCCGG CCCTTGCTCG CGGTGAAATA
CGCGTCATAG GTGCGACCAC GCTGGATGAG TACAGAAAAC ACATAGAAAA AGACAAAGCG
CTCGCGAGAA GATTCCAGCC GGTGATGGTG AGAGAACCGA GTGTGGAGGA GACCATAGAG
ATCTTGAAAG GGTTGAAGAA AGTCTACGAG GAGCACCACA AAGTGAAGAT AGAAGACGAA
GCGATAGAGG CAGCTGCCAA GCTCTCAGCG AGGTACATAA CAGACAGATT CTTGCCGGAC
AAGGCGATTG ACCTGTTGGA TGAAGCGGCA GCAAGAGTGA GACTCAGCGC TACAAAACAG
GAAAAGGATG AAACGAAGCT TCGCGAGCTC GAAGAAAAAA TAAAAGAGCT TGAAGCAAAA
ATCGACGAGC TCACTATAAG ATCTCAGTAC AAAGAAGCGG CCGATCTCAA GAAAGAACTC
TTCAAACTCA GGAACGAGTA CGAAGCTTTG AAGAGTGGGA AACCGGTTGT CACAGCGGAG
AAAATAGCAG AAGTGGTTGA ATCCTGGTCT GGTGTACCAG TTTCCAGAAT CGTTGAGTCT
GAAAAGGAAA AGCTTCTGAA GCTCGAAGAG ATAATCCACC AGAGACTCGT GGACCAGGAG
GAAGCGGTCA AGGTAGTGGC CGATGCCATC AGGAAGGCAA GGGCTGGAAT AAAAGATCCT
AACAGGCCAG TTGGTACCTT CCTCTTCCTT GGACCAACGG GTGTTGGTAA GACTGAGCTC
GCAAAGACAC TCGCTGAAGT GCTCTTTGGA AGCGAAAACG CACTGATACG AATCGACATG
ACCGAATACA TGGAAAAGCA CGCTGTCTCC AAGCTGATAG GAGCACCTCC GGGATACGTC
GGTTACGAGG AAGGTGGTCA GCTGACCGAA GCCGTAAGAA GAAGACCGTA CAGTGTCGTA
CTGCTTGATG AGATTGAAAA GGCGCATCCG GATGTGTTCA ACGTACTGCT TCAGATAATG
GACGACGGAA GACTCACAGA CAGCAAAGGA AACGTTGTGG ATTTCAAGAA CACGATCATC
ATCATGACGA GTAACATAGC AAGCGATCTG ATACTGAACT ACGTTAAAGA AGGAAAGAGC
TTCGATGAGA TTGAAGAAAG AGTCAGAGAA GAGCTGAAAC ACTACTTCAG ACCCGAGTTC
ATAAACAGGA TAGACCACGT TGTTGTCTTC AAACCGCTTA CAAAAGAACA CATGAAACAG
ATCGTGGAAA TAATGATTAG AAGACTTGAA GCGCGGTTGA AGGACAAGAA CATAAAACTC
ACGATCACCG AATCGGCGAA AGAATACCTC GCAGAAGAAG GATACGATCC AACGTTCGGT
GCAAGACCGC TGAGGCGGCT GATAGAAAGG GAAATAGAAA CACCACTCGC AAGGATGATC
ATAGCAGGTG AAGTGCAGGA AGGTCAGACG GTGAGAGTGG ATTACAACGG TGAAAAATTG
ATCCTCGAAG TTGCCAGAGA ACTCGAGAAG GTTCAGTAA
 
Protein sequence
MRNLNDKMKD IFERSVEDIK ERNQNLLRPE HILLQILYDE NEATKVLKDL NVNVEEVITE 
LEDYIDSQYG IYYGFSDQVY VSKELSYILE LARKEARLFK QRDVGPLHFL LGLLRDGSTH
AARVLKKYGV DYEKVLQKIR EHEEEYATEQ SPLTAFATDL TKLAKEGKVG PIIGRDKEIE
RVIEILMRKT KNNPILIGDP GVGKTAIVEG LTQRIVEGKV PDPLKDVRIL MVDLGRMIAG
TKYRGEFEER LKSFLDEVMK QKEKTILFID EIHTLVGAGA AEGAMDAANM LKPALARGEI
RVIGATTLDE YRKHIEKDKA LARRFQPVMV REPSVEETIE ILKGLKKVYE EHHKVKIEDE
AIEAAAKLSA RYITDRFLPD KAIDLLDEAA ARVRLSATKQ EKDETKLREL EEKIKELEAK
IDELTIRSQY KEAADLKKEL FKLRNEYEAL KSGKPVVTAE KIAEVVESWS GVPVSRIVES
EKEKLLKLEE IIHQRLVDQE EAVKVVADAI RKARAGIKDP NRPVGTFLFL GPTGVGKTEL
AKTLAEVLFG SENALIRIDM TEYMEKHAVS KLIGAPPGYV GYEEGGQLTE AVRRRPYSVV
LLDEIEKAHP DVFNVLLQIM DDGRLTDSKG NVVDFKNTII IMTSNIASDL ILNYVKEGKS
FDEIEERVRE ELKHYFRPEF INRIDHVVVF KPLTKEHMKQ IVEIMIRRLE ARLKDKNIKL
TITESAKEYL AEEGYDPTFG ARPLRRLIER EIETPLARMI IAGEVQEGQT VRVDYNGEKL
ILEVARELEK VQ