Gene Tpet_0048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0048 
Symbol 
ID5171543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp43666 
End bp43863 
Gene Length198 bp 
Protein Length65 aa 
Translation table11 
GC content45% 
IMG OID640562546 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001243653 
Protein GI148269193 
COG category[R] General function prediction only 
COG ID[COG1245] Predicted ATPase, RNase L inhibitor (RLI) homolog 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTTACA AGATCGTGGT GAATTACGAC TGGTGCAAAG CGTGTAAGCT GTGCGCGTGG 
GCTTGTCCGA CTGGTGCCAT TACAAGCGAT GAAATAGGAA AACCCGTGAC AAACGAGAAC
AAATGCATCG GATGTTTAAA ATGTGAGAAA ATATGTCCGG ATATGGCCAT AGAAATTGTG
AGTGATGAGA ATGCCTGA
 
Protein sequence
MGYKIVVNYD WCKACKLCAW ACPTGAITSD EIGKPVTNEN KCIGCLKCEK ICPDMAIEIV 
SDENA