| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0046 |
|---|
| Symbol | |
|---|
| ID | 5170513 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | + |
|---|
| Start bp | 41540 |
|---|
| End bp | 42454 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640562544 |
|---|
| Product | homoserine O-succinyltransferase |
|---|
| Protein accession | YP_001243651 |
|---|
| Protein GI | 148269191 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1897] Homoserine trans-succinylase |
|---|
| TIGRFAM ID | [TIGR01001] homoserine O-succinyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCCAATAA ACGTTCCAAG CGGTCTTCCT GCTGTGAAAG TCTTGGCAAA AGAGGGCATT
TTCGTTATGA CGGAAAAGAG GGCGATCCAC CAGGACATCC GCCCTCTTGA AATTCTCATT
CTGAACCTGA TGCCAGACAA AATAAAAACG GAGATTCAAC TTCTCAGACT CCTTGGAAAC
ACTCCTCTTC AGGTGAATGT GACCTTACTC TACACCGAAA CTCACAAACC GAAACACACT
CCCATTGAAC ACATTCTAAA GTTCTACACA ACTTTTTCCG CTGTTAAAGA TAGAAAATTC
GATGGATTCA TCATCACGGG CGCTCCCGTG GAACTCCTTC CGTTCGAAGA AGTGGATTAC
TGGGAAGAAC TCACAGAAAT CATGGAATGG AGCCGCCACA ACGTGTACTC AACCATGTTC
ATCTGCTGGG CGGCTCAGGC GGGACTGTAC TATTTCTACG GAATACCGAA GTACGAACTT
CCACAGAAGC TCTCAGGCGT TTACAAGCAC AGAGTCGCAA AAGATTCGGT CCTCTTCAGG
GGACACGACG ACTTCTTCTG GGCGCCGCAC TCGCGGTACA CCGAAGTGAA GAAGGAAGAC
ATAGACAAAG TACCGGAGCT TGAGATCCTT GCAGAGTCGG ACGAAGCTGG TGTTTACGTG
GTTGCAAACA AAAGCGAAAG ACAGATATTC GTCACAGGAC ATCCCGAGTA CGACAGATAC
ACACTGCGAG ACGAATATTA TCGAGATATA GGTCGAAATC TGAAGGTGCC GATTCCTGCC
AATTACTTTC CAAACGACGA TCCCACAAAA ACTCCCATTC TCACCTGGTG GAGTCATGCT
CACCTCTTCT TCAGCAACTG GTTGAATTAC TGCATCTACC AGAAAACACC TTACAGATTG
GAAGACATAC ACTGA
|
|---|
| Protein sequence | MPINVPSGLP AVKVLAKEGI FVMTEKRAIH QDIRPLEILI LNLMPDKIKT EIQLLRLLGN
TPLQVNVTLL YTETHKPKHT PIEHILKFYT TFSAVKDRKF DGFIITGAPV ELLPFEEVDY
WEELTEIMEW SRHNVYSTMF ICWAAQAGLY YFYGIPKYEL PQKLSGVYKH RVAKDSVLFR
GHDDFFWAPH SRYTEVKKED IDKVPELEIL AESDEAGVYV VANKSERQIF VTGHPEYDRY
TLRDEYYRDI GRNLKVPIPA NYFPNDDPTK TPILTWWSHA HLFFSNWLNY CIYQKTPYRL
EDIH
|
|---|
| |