Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0042 |
Symbol | |
ID | 5170862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | + |
Start bp | 37504 |
End bp | 38061 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640562540 |
Product | hypothetical protein |
Protein accession | YP_001243647 |
Protein GI | 148269187 |
COG category | [S] Function unknown |
COG ID | [COG1751] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00261676 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCCTGT TCGAAAAACC AGGAAAGGAG AACACAAGAA AAACCCTCGA AATAGCGATT CAAAAAGCCT CTGAGCTTTC TTCAAAAAAG CTGTTGATCG CTTCCGCTAC GGGTTACAGT GCTAGAATGG CCCTCGAGAT GATTCCGGAA GACATGAAGC TCGTTGTGGT GACACACCAC GCGGGCTTTG AAGAACCCGA CACTCAGGAA TTCGACGAAG AATTGAGAAA ATTGTTGAAA GAAAAGGGTC ACGATGTTCT CACAGCAACG CATGCCCTCT CCGCAGGTGA GAGATCTCTG AGAAGAAAAT TTGGTGGAAT CTACCCTCTT GAGATAATAG CGAACACGCT GAGAATGTTC AGCGAAGGTG TGAAGGTGGG TGTGGAGATA ACGCTCATGG CGGCTGACGC GGGACTTGTT AAAACGTCTG AACTGGTTGT TGCCTGCGGT GGAACAGAGA GCGGTCTCGA CTCGGCAATT GTTGTCAAGC CCGCGAATTC TCCAAATCTT TTCGATCTAA AGATCACGGA AATTCTCTGT AAACCTCTGA TTTCTTGA
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Protein sequence | MVLFEKPGKE NTRKTLEIAI QKASELSSKK LLIASATGYS ARMALEMIPE DMKLVVVTHH AGFEEPDTQE FDEELRKLLK EKGHDVLTAT HALSAGERSL RRKFGGIYPL EIIANTLRMF SEGVKVGVEI TLMAADAGLV KTSELVVACG GTESGLDSAI VVKPANSPNL FDLKITEILC KPLIS
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