Gene Tpet_0042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0042 
Symbol 
ID5170862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp37504 
End bp38061 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content47% 
IMG OID640562540 
Producthypothetical protein 
Protein accessionYP_001243647 
Protein GI148269187 
COG category[S] Function unknown 
COG ID[COG1751] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00261676 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCCTGT TCGAAAAACC AGGAAAGGAG AACACAAGAA AAACCCTCGA AATAGCGATT 
CAAAAAGCCT CTGAGCTTTC TTCAAAAAAG CTGTTGATCG CTTCCGCTAC GGGTTACAGT
GCTAGAATGG CCCTCGAGAT GATTCCGGAA GACATGAAGC TCGTTGTGGT GACACACCAC
GCGGGCTTTG AAGAACCCGA CACTCAGGAA TTCGACGAAG AATTGAGAAA ATTGTTGAAA
GAAAAGGGTC ACGATGTTCT CACAGCAACG CATGCCCTCT CCGCAGGTGA GAGATCTCTG
AGAAGAAAAT TTGGTGGAAT CTACCCTCTT GAGATAATAG CGAACACGCT GAGAATGTTC
AGCGAAGGTG TGAAGGTGGG TGTGGAGATA ACGCTCATGG CGGCTGACGC GGGACTTGTT
AAAACGTCTG AACTGGTTGT TGCCTGCGGT GGAACAGAGA GCGGTCTCGA CTCGGCAATT
GTTGTCAAGC CCGCGAATTC TCCAAATCTT TTCGATCTAA AGATCACGGA AATTCTCTGT
AAACCTCTGA TTTCTTGA
 
Protein sequence
MVLFEKPGKE NTRKTLEIAI QKASELSSKK LLIASATGYS ARMALEMIPE DMKLVVVTHH 
AGFEEPDTQE FDEELRKLLK EKGHDVLTAT HALSAGERSL RRKFGGIYPL EIIANTLRMF
SEGVKVGVEI TLMAADAGLV KTSELVVACG GTESGLDSAI VVKPANSPNL FDLKITEILC
KPLIS