| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0039 |
|---|
| Symbol | |
|---|
| ID | 5170734 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | - |
|---|
| Start bp | 34489 |
|---|
| End bp | 35097 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640562537 |
|---|
| Product | thiamine pyrophosphokinase |
|---|
| Protein accession | YP_001243644 |
|---|
| Protein GI | 148269184 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1564] Thiamine pyrophosphokinase |
|---|
| TIGRFAM ID | [TIGR01378] thiamine pyrophosphokinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000099633 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGTGTA TTTTTGCAAA CGGTTCCTAC GAAGAGTTCG TGGATGTTTC CCGTTGTGAA
AGGATCGTGG CGGTGGACGG AGGAGCGAAC TACCTGAGAA CAAGAAACAT TGTACCAGAT
CTTTTCATAG GTGATGCCGA TTCGGCGAAA GAGGAAACCA TGGAGTGGTT GAAACAACAC
GGGGTAACGC TGAAGATATT TCCAAGAGAG AAGGACGAAA TAGACCTTGA ACTTGCACTT
CGAGAGTTTG AAGAGGAAGA AAAGGTTGTC TTCGGATGGA AGGGAGAACG CCTCGACATG
GTGCTCGCTC TTTTCTACCT GTTAAAACGC TTCAAAAACA CAACCCTTGA ATCATCTTCT
CTTACGGTTG GTTACGTGGA AGGAGCAAAA ACTCTTTCCG CTGTTCCTGG GGAAAAGTGG
TCCATACTAC CGCTCGGTGG CGACGCAGAA GGTGTGACTC TCAAAGGCTT CAAATACACC
CTTGAGGATG CCGTTATGCC CATCACAAAA CCCTACGGTG TGAGCAACGA AGCTGTGAGC
GATAGGGTCA CGATAGAAGT GAAGAAGGGA GGTTTGATCT ACTTCAGATG GAAGAAAGAA
CCCTCGTGA
|
|---|
| Protein sequence | MVCIFANGSY EEFVDVSRCE RIVAVDGGAN YLRTRNIVPD LFIGDADSAK EETMEWLKQH
GVTLKIFPRE KDEIDLELAL REFEEEEKVV FGWKGERLDM VLALFYLLKR FKNTTLESSS
LTVGYVEGAK TLSAVPGEKW SILPLGGDAE GVTLKGFKYT LEDAVMPITK PYGVSNEAVS
DRVTIEVKKG GLIYFRWKKE PS
|
|---|
| |