Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0035 |
Symbol | |
ID | 5171239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 30266 |
End bp | 30871 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640562533 |
Product | CBS domain-containing protein |
Protein accession | YP_001243640 |
Protein GI | 148269180 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2239] Mg/Co/Ni transporter MgtE (contains CBS domain) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000268631 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAGTCA AAAAATGGGT CACCCAGGAC TTCCCGATGG TTGAAGAATC AGCTACAGTG AGAGAATGTC TGCACAGGAT GAGGCAGTAC CAGACGAACG AATGTATTGT CAAAGATCGG GAAGGCCACT TCAGAGGAGT GGTGAACAAG GAGGATTTGC TGGATCTGGA TCTCGATTCT TCTGTATTCA ATAAAGTTTC CCTTCCGGAC TTTTTCGTCC ACGAAGAAGA CAACATCACC CACGCTCTTC TTCTGTTTCT GGAGCACCAG GAGCCTTACC TTCCGGTGGT TGATGAAGAG ATGCGCCTCA AGGGTGCTGT GAGTCTTCAT GATTTTCTTG AAGCGCTCAT AGAGGCTCTG GCGATGGACG TTCCTGGTAT CCGTTTTTCT GTCCTTCTCG AGGACAAACC TGGAGAGTTG AGGAAGGTTG TAGATGCCTT AGCGCTCAGT AACATAAACA TCTTATCCGT TATCACAACA AGGTCACAAG ATGGCAAGAG AGAGGTTCTC ATCAAAGTGG ACGCGGTAGA TGAAGGAACA CTCATCAAGC TTTTTGAAAG TCTTGGGATA AAAATAGAAT CCATCGAAAA GGAAGAGGGG TTCTGA
|
Protein sequence | MKVKKWVTQD FPMVEESATV RECLHRMRQY QTNECIVKDR EGHFRGVVNK EDLLDLDLDS SVFNKVSLPD FFVHEEDNIT HALLLFLEHQ EPYLPVVDEE MRLKGAVSLH DFLEALIEAL AMDVPGIRFS VLLEDKPGEL RKVVDALALS NINILSVITT RSQDGKREVL IKVDAVDEGT LIKLFESLGI KIESIEKEEG F
|
| |