Gene Tpet_0033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0033 
Symbol 
ID5171630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand- 
Start bp28915 
End bp29544 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content45% 
IMG OID640562531 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001243638 
Protein GI148269178 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.000234295 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAATTGA AAATCCTCGT AACGGGAGGA AGCGTTTTCG TTCCAGGAAG GTTGAACGCT 
CACTTTTCCA CAGTCGTTTA TCTGGAACAC AAGGACAGAA GAATCATCAT CGACCCCGGT 
AACCTCTCTT CTATGGACGA ACTGGAAGAA AAGTTCTCTG AGCTGGGAAT CTCCCCGGAT 
GATATAACGG ACGTTCTCTT CACGCATGTG CATCTCGATC ATATCTTCAA CTCTGTCCTC 
TTCGAGAATG CTACTTTCTA TGTTCATGAA GCTTACAAAA CGAAGAACTA TCTTTCTTTT 
GGTACGATCG TGGGAAGAAT CTATTCAAAA GTGATCTCTT CGTGGAAGAA TGTGGTGCTT 
CTGAAGGGAG AAGAGTCGCT GTTCGATGAA AAAGTAAAGG TGTTTCACAC CCCATGGCAC 
GCCAGAGAGC ACCTTTCTTT TCTTCTCGAT ACGGAGAATG CGGGAAGAGT GCTGATCACG 
GGGGATATAA CACCTAACAG GCTTAGCTAC TATGATATAA TCAAAGGGTA CGGAAGTGTT 
CAGGTTAAGA ACTTCCTTGA CAGAGTTGGA AGGATCGATC TTTTAGTTTT TCCACACGAC 
GCACCGCTGA AACTGGAGGT GAAAAAATGA
 
Protein sequence
MELKILVTGG SVFVPGRLNA HFSTVVYLEH KDRRIIIDPG NLSSMDELEE KFSELGISPD 
DITDVLFTHV HLDHIFNSVL FENATFYVHE AYKTKNYLSF GTIVGRIYSK VISSWKNVVL 
LKGEESLFDE KVKVFHTPWH AREHLSFLLD TENAGRVLIT GDITPNRLSY YDIIKGYGSV 
QVKNFLDRVG RIDLLVFPHD APLKLEVKK