| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0032 |
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| Symbol | |
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| ID | 5170965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 27458 |
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| End bp | 28918 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640562530 |
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| Product | glycogen/starch synthase, ADP-glucose type |
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| Protein accession | YP_001243637 |
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| Protein GI | 148269177 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0297] Glycogen synthase |
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| TIGRFAM ID | [TIGR02095] glycogen/starch synthases, ADP-glucose type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000464637 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGTAG TATTCGTTTC TTACGAGGTT TTTCCGTTCG CGAAAGTAGG AGGACTGGCG
GACGTTGCTG GAACTCTTCC AAAGTATTTG AAGAAACACG GGGTGGATGT CACGATAGTT
ATGCCGAAAC ACAGAATCGT TGAAAAAAAT GCAGAGAAAT TTGGGTATGA GATCAAGAAA
GTAGCCGAAG GTCTCTCTGT TTCTCATGTC AAAACCGATC AAAAGTTCGA TATATACGAA
TCCGTTCTTC CCGGTAGCGA TGTGAAAACG TATTTCGTTG CCAACGATTA CTATTTCTCC
GCGGAAGATG TCTATGCGGG GCCAGATCTT GGTGAACAGG CGATTTTCTT CTGCGCAGCT
ACTCTGGATC TGGTAAAACA TCTTGATTTG AAGCCCGATA TCGTCCATGT GAACGACTGG
CAAACCGCTC TGATTCCTGT CTATTTGAAA ACCGTTTACA GGGACGATCC TTACTTTTCC
AGAACGGCCA CGGTTTTGAC GATACACAAC CTTGGATATC AGGGCGTGTT CGATCCGAAG
TACCTCTCTT TTGCAGGCCT TCCCGATTAT GTTTTCACTA TCGACGGCCT TGAGTTCTAC
AGACAGCTGA ATTTCCTCAA GGGTGGAATA GTGTTCAGCG ATGTGATAAA CACGGTTAGC
CCCACTTACG CCGAGGAAAT TCAGACGGAA GAGTACGGCG AGAAACTCGA GGGTGTACTG
AGAATGCGTT CGAAAGATCT CTACGGTATA TTGAACGGAA TAGATTACGA GCTTTATAAC
CCAGCTACGG ACAGATACAT TTACGTCAAC TACGATGTGA ATCGTCTTGA ACTCAAGTGG
GAAAACAAGG TGAAACTCCA GGAAGAACTG GGACTTCCCG TTAACAAGGA AACGGCTGTA
GCCGGGTTGA TAAGCAGACT CGTCCCTCAA AAAGGTCTGG ACCTTCTGGT TGATGTGATG
GATTATCTGA TGCTCTTCGA TCTTCAGATC GTTGTTCTTG GAACGGGAGA CGAACAGTAC
GAAAACGCCT TCAGAAAGTT CCAGGAGAGG TATCCAGACA AAGTATCAGC GAACATAAAA
TTCGATGTCG AGCTGGCGCA GAAGATATAC GCTGGTGCGG ACATATTCCT CATGCCGAGC
AGATACGAAC CGTGCGGTTT GGGACAGATG TTCAGCATGA GATATGGAAC AATCCCCGTT
GTGAGATACA CGGGAGGCCT GGCAGATACT GTGAAAGAAT ACGATCCACA ATCGATGGAA
GGAACGGGTT TTGGATTCAA GAAGTACGAT TCTGCTCATC TGTTGAAGGC TGTTTCGAAG
GCTTTGCACT TTTACTACAG GGAAAAAGAT CACTGGAGAA GAATCATGAC AAACGCCATG
AACACGGATC TGTCCTGGGA CAGGTCTGCC AAAGAGTACG TTGATCTTTA CAAAAAAGCC
CTTGCAAAGG TTGGAAGGTG A
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| Protein sequence | MKVVFVSYEV FPFAKVGGLA DVAGTLPKYL KKHGVDVTIV MPKHRIVEKN AEKFGYEIKK
VAEGLSVSHV KTDQKFDIYE SVLPGSDVKT YFVANDYYFS AEDVYAGPDL GEQAIFFCAA
TLDLVKHLDL KPDIVHVNDW QTALIPVYLK TVYRDDPYFS RTATVLTIHN LGYQGVFDPK
YLSFAGLPDY VFTIDGLEFY RQLNFLKGGI VFSDVINTVS PTYAEEIQTE EYGEKLEGVL
RMRSKDLYGI LNGIDYELYN PATDRYIYVN YDVNRLELKW ENKVKLQEEL GLPVNKETAV
AGLISRLVPQ KGLDLLVDVM DYLMLFDLQI VVLGTGDEQY ENAFRKFQER YPDKVSANIK
FDVELAQKIY AGADIFLMPS RYEPCGLGQM FSMRYGTIPV VRYTGGLADT VKEYDPQSME
GTGFGFKKYD SAHLLKAVSK ALHFYYREKD HWRRIMTNAM NTDLSWDRSA KEYVDLYKKA
LAKVGR
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