Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0018 |
Symbol | |
ID | 5170368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | + |
Start bp | 16950 |
End bp | 18074 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640562516 |
Product | flagellar biosynthetic protein FlhB |
Protein accession | YP_001243623 |
Protein GI | 148269163 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1377] Flagellar biosynthesis pathway, component FlhB |
TIGRFAM ID | [TIGR00328] flagellar biosynthetic protein FlhB |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000937461 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCGGAA GTGGCTCAGA AGATTTCAGC GCTCAGCTGG AACGCTATTC AGGAACTTCT TGGGAAATAG AGCTCCTGCT CTTTGCCGAA GCAGAGAGAA CAGAGCGCGC CACTCCCAGA AAAAGAAGGA GAGTAAGAGA AGAAGGTAGA GCTCCCGTAT CCAGGGAGCT CAACATGGCC GTCACCTTTC TCGTGTTCGC TTTAGCGCTG AAGATCTTTG GATATCAGGG TGTAGAGAGG ATCACAGAAG ACGTTCAGGC CTTTCTCTCG TTTGAAGAAA CAGAGGATTT ACTCGTGAAT GCAGTAAACA CTTTTAAAGA CGTGCTTTTG ATCATAGGAG CCTTTGTGGT CTTCTCCATG GTCGCAGGTG TTATGATTGG GGCCCTTCAA ACGAGATTTT TGTTTGCTCC GAAAGCGTTG AAACCGGACC TCAACAGAAT CAACCCGATA GAAGGTTTTA AGAGATTGTT CTCACTCAGA TCACTCGTGG AACTTTTGAA GTCTGTCCTT AAAGTCGCCA TCGTGGGGAT CGTGGTCTAC CAGGTCTTGA AAAACAGATG GGACGAAATG ATTCTCTTAA CAGAAATGAA CGTGAACGAC GCCTTTGCTA ATTTCTGGGA CATCGCATCC GAGATCACGT TGAAAAGCGG AATGGTCCTT CTCGCTCTTG CCGTTTTCGA CTACTTCTAC CAGAGATGGG AATTCGAAAA GAGCATCCGC ATGACGAAGC AGGAAGTGAA GGATGAACTG AAAGAAGTGG AAGGAAATCC CGAGATAAAG CGAAGACAAA GACAGATGAT GTATGATATC CTACGAAGAA GAATGATGGA AGAGGTCCCG AAGGCGGATG TCGTGATCAC CAACCCCACT CACTTCGCTG TTGCTTTGAA GTACGATCCA GATACGATGA ACGCACCAGT TGTGGTAGCG AAAGGTGTGG ATCATCTGGC ACTGAAAATA ATAGAAATCG CAAAGGAGAA CGATGTACCC GTTTTGAGAA ATCCGTCTCT TGCGAGGGCT CTATACTATA AGACGGAGAT AGGTGAAGAA ATTCCGGTAG AATTTTACAG GATAGTGGCG GAGGTACTCG TTTACGTTTA CACGAAAAAG GGCGTGAGAA TTTGA
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Protein sequence | MGGSGSEDFS AQLERYSGTS WEIELLLFAE AERTERATPR KRRRVREEGR APVSRELNMA VTFLVFALAL KIFGYQGVER ITEDVQAFLS FEETEDLLVN AVNTFKDVLL IIGAFVVFSM VAGVMIGALQ TRFLFAPKAL KPDLNRINPI EGFKRLFSLR SLVELLKSVL KVAIVGIVVY QVLKNRWDEM ILLTEMNVND AFANFWDIAS EITLKSGMVL LALAVFDYFY QRWEFEKSIR MTKQEVKDEL KEVEGNPEIK RRQRQMMYDI LRRRMMEEVP KADVVITNPT HFAVALKYDP DTMNAPVVVA KGVDHLALKI IEIAKENDVP VLRNPSLARA LYYKTEIGEE IPVEFYRIVA EVLVYVYTKK GVRI
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