Gene Tpet_0012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0012 
SymbolrnhB 
ID5171027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand+ 
Start bp12154 
End bp12870 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content44% 
IMG OID640562510 
Productribonuclease HII 
Protein accessionYP_001243617 
Protein GI148269157 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAATAG ATGAGCTCTA CAAAAAAGAG TTTGGAATCG TAGCAGGTGT GGATGAGGCG 
GGAAGAGGGT GCCTCGCAGG CCCTGTTGTG GCGGCCGCTG TCGTTCTGGA AAAAGAAATA 
GAAGGAATAA ACGATTCAAA ACAGCTTTCC CCTGCGAAGA GGGAAAGACT TTTCGATGAA 
ATAATGGGGA AAGCAGCTGT TGGTATAGGA ATTGCCTCTC CAGAGGAAAT AGATCTTCAC 
AACATATTCA ACGCCACAAA ACTCGCTATG AATCGAGCAC TGGAGAATCT GTCCGTGGGA 
CCATCATTTG TACTCGTTGA CGGGAAAGGA ATCGAGTTGA GAGTTCCCGG TACATGCTTA 
GTGAAGGGAG ACCAGAAAAG CAAATTGATA GGAGCAGCTT CCATTGTTGC GAAGGTCTTC 
AGAGATAGAT TGATGAGCGA GTTTCACAAG ATGTATCCCC AGTTTTCCTT CCACAAACAC 
AAAGGTTACG CAACAAAAGA ACACCTGAAC GAAATCAGAA AGAATGGAGT TTTGCCCATC 
CACCGGATGA GTTTTGAACC TGTTTTAGAA CTTCTGACCG ACGATTTGCT GAGGGAGTTC 
TTCGAAAAAG GCCTCATCTC CGAAAATCGA TTCGAACATA TAAAGAATCT TCTGGAGGCG 
AAAAAGAGTG TGGTTTTCCG GAAAGAAAGA ACAGACCATA ATCTCCCTCT TTTTTAA
 
Protein sequence
MGIDELYKKE FGIVAGVDEA GRGCLAGPVV AAAVVLEKEI EGINDSKQLS PAKRERLFDE 
IMGKAAVGIG IASPEEIDLH NIFNATKLAM NRALENLSVG PSFVLVDGKG IELRVPGTCL 
VKGDQKSKLI GAASIVAKVF RDRLMSEFHK MYPQFSFHKH KGYATKEHLN EIRKNGVLPI 
HRMSFEPVLE LLTDDLLREF FEKGLISENR FEHIKNLLEA KKSVVFRKER TDHNLPLF