| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0006 |
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| Symbol | |
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| ID | 5170662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 6046 |
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| End bp | 6510 |
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| Gene Length | 465 bp |
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| Protein Length | 154 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640562504 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_001243611 |
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| Protein GI | 148269151 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAGGAGTT TTTTCCTGTG CTTTCTGCTT GTTCTTGTGT TTATAGCGAA TCTCTACAGA
TTGTTCCCAG ATGATTATTA CGATTTCATA TCCAAAAATT CCGATGATCT CGATCCTCTT
CTCATTCAAA GTATCATATG GGTGGAGAGC AGTTTTGACA GAAACGCGGT TTCTTCGCTG
GGAGCCCTTG GTCTCATGCA GATCATGCCT TCAACGGCCG TCTGGTTGAA AAAGAAATTT
TCTCTGGAGG AGGATTTCAA GGATCCAGAG GGAAACATAA TCTACGGAAT CGTTTATCTG
AGATTTTTGA AAGATCTGTA CGGGGATCTC GACAAAGCTA TCATGGCTTA CAACATAGGG
CCAACTGCTC TGGACGAAGG AAGAAATCTG GACAGTGCGA GAAGATACTT GAAAAAAGTG
AAGAGGACCT ATCTCATATA CCGTTTCCTC TACAATGAGA GGTGA
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| Protein sequence | MRSFFLCFLL VLVFIANLYR LFPDDYYDFI SKNSDDLDPL LIQSIIWVES SFDRNAVSSL
GALGLMQIMP STAVWLKKKF SLEEDFKDPE GNIIYGIVYL RFLKDLYGDL DKAIMAYNIG
PTALDEGRNL DSARRYLKKV KRTYLIYRFL YNER
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