| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7802 |
|---|
| Symbol | ftsH |
|---|
| ID | 5151016 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 8188062 |
|---|
| End bp | 8189954 |
|---|
| Gene Length | 1893 bp |
|---|
| Protein Length | 630 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640562428 |
|---|
| Product | cell division protein |
|---|
| Protein accession | YP_001243535 |
|---|
| Protein GI | 148258950 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0465] ATP-dependent Zn proteases |
|---|
| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.120789 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGGACGCG CCATGCAGTT CAGTAAGGAA ACGACTTTCA ACATCTGGTA TGTGGTTGCG
GCCGTTTTCG GCGTTCTGTT GATTCAGCAT TTCTGGATCG AGAGCCAGCG CGTCGAGCCG
ATCCCCTATA GCGAATTCGA GCGTTATCTC GATGATGGAA AGATCAACAA CATCGTCGTC
GGCAATCAGT TCATCCGCGG TTACTTCAAA GAGCCGCGCG ACGGTCGCAC GCAATTTGTG
ACCACGCGGG TCGATCCGGC TTTGGCCCAG AAGCTTGCTG AAAAGGGCGT GCGCTTTACT
GGGGCCGTCG AAAGCACCTT ACTTCGCGAT ATCCTCTCAT GGGTTCTGCC CATCCTGCTC
TTCTTCGGCC TGTGGATGTT CGTGTTTCGG CGAGTAGCGG AGAAGCAGGG GCTGGGCAAC
TTTCTGCCGA TCGGCAAGAG CAAGGCCAAG GTCTATGTCG AGAAAGATAT CAAGGTCACG
TTCAACGACG TCGCTGGCGT CGATGAAGCC AAGGAAGAAC TGAAGGAGGT CGTCGCCTTC
CTGCGGGCGC CGCAGGAATA CGGCCGGCTT GGTGCGCGTA TCCCGAAGGG CGTCCTTCTG
GTGGGACCGC CGGGTACGGG CAAGACGATG CTGGCACGCG CGATCGCGGG CGAGGCCGGC
GTGCCGTTTT TATCGATCAA CGGCTCCGAA TTCGTGGAAA TGTTCGTCGG CGTTGGTGCG
GCGCGCGTGC GCGACCTGTT CGAGCAGGCA AGAAGCATGG CACCCTGCAT CATTTTCATC
GACGAGCTGG ATGCGCTGGG CAAGGCGCGC GGCGCATTTC CGGCCGTCGG CGGTCACGAC
GAGCGCGAAC AGACGCTCAA TCAGCTTCTG GTCGAGCTCG ACGGCTTCGA TCCGGCGCAG
GGCATCGTAC TTCTGGCCGC CACCAACCGC CCGGAAATCC TCGATCCCGC TCTGTTACGC
GCCGGCCGCT TCGATCGACA GGTTCTCATC GACCGTCCCG ACAAGACCGG CCGCGTCCAA
ATTCTGAAGG TGCACATGCG GAAAGTGACC TTGGCCGAGG ATGTCGACCC AGAAAAGATC
GCAGCTCTGA CCACGGGATT CACTGGTGCC GACCTCGCCA ATCTGGTTAA CGAGGCCGCC
CTCCTGGCCA CCCGCCGGGG CGCGTCGGCG GTTGCCATGC AGGATTTTAC GGCCGGCATC
GAGCGCATCG TCGCCGGTCT GGAAAAGAAG AATCGGCTGC TCAACCCGAA CGAGCGAAAG
GTTGTTGCCT ATCACGAGAT GGGCCATGCG CTGGTTGCAC TCGCGATTTC CAAAACTGAT
GCCGTTCACA AGGTCTCGAT CATTCCACGC GGGGTAGGCG CGCTTGGCTA TACGATCCAG
CGGCCGACCG AGGACCGCTA TTTAATGACC CGCGACGAAC TCGAAGCCAA AATCGCTGTT
CTGTTGGGCG GGCGTGCTGC CGAGAAATTG GTGTTCGGAA AGCTTTCGAC CGGCGCCGCC
GACGATCTCG CCAAGGTGAC CGACATTGCC CGCAATATGG TGGTGCGCTA CGGCATGGAC
GAAACCCTCG GCTATGTCGT GTACGAACCC GAACGGCCTT CCTTCTTGGG CAATGTGCCA
GGACAGGCGC CGAGCGAGCG TCAATTCAGC GAAACGACGG CTGAAGCGAT CGACGCTGCC
GTGAAATCGA TCGTCCATGC CGTGTTCGAT CGGACAACCG TAATCCTTAC CGCCAACCGT
GATGTTCTGG AGCGCTGCGT CAAATCCTTG CTCGAAAAAG AGACGTTGAA CGAAGACGAA
CTGCGCGAGC TTACCCGCGA TCTGCGTTCG CCTGGCACTC AGGCCATGGC CGCGCCGGCC
ATGACGGCCG CCGCTCAAGC CGCGAGGGCA TGA
|
|---|
| Protein sequence | MGRAMQFSKE TTFNIWYVVA AVFGVLLIQH FWIESQRVEP IPYSEFERYL DDGKINNIVV
GNQFIRGYFK EPRDGRTQFV TTRVDPALAQ KLAEKGVRFT GAVESTLLRD ILSWVLPILL
FFGLWMFVFR RVAEKQGLGN FLPIGKSKAK VYVEKDIKVT FNDVAGVDEA KEELKEVVAF
LRAPQEYGRL GARIPKGVLL VGPPGTGKTM LARAIAGEAG VPFLSINGSE FVEMFVGVGA
ARVRDLFEQA RSMAPCIIFI DELDALGKAR GAFPAVGGHD EREQTLNQLL VELDGFDPAQ
GIVLLAATNR PEILDPALLR AGRFDRQVLI DRPDKTGRVQ ILKVHMRKVT LAEDVDPEKI
AALTTGFTGA DLANLVNEAA LLATRRGASA VAMQDFTAGI ERIVAGLEKK NRLLNPNERK
VVAYHEMGHA LVALAISKTD AVHKVSIIPR GVGALGYTIQ RPTEDRYLMT RDELEAKIAV
LLGGRAAEKL VFGKLSTGAA DDLAKVTDIA RNMVVRYGMD ETLGYVVYEP ERPSFLGNVP
GQAPSERQFS ETTAEAIDAA VKSIVHAVFD RTTVILTANR DVLERCVKSL LEKETLNEDE
LRELTRDLRS PGTQAMAAPA MTAAAQAARA
|
|---|
| |