Gene BBta_7739 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_7739 
Symbol 
ID5149751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp8130541 
End bp8132526 
Gene Length1986 bp 
Protein Length661 aa 
Translation table11 
GC content66% 
IMG OID640562379 
Productconjugal transfer coupling protein TraG 
Protein accessionYP_001243486 
Protein GI148258901 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3505] Type IV secretory pathway, VirD4 components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.477093 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGCAA CGAAGATTCT CTGGGGTCAG ATTCTGGTCG TCGCGCTGAT CATCCTGGCG 
ACGACCTGGG GCGCCACGGA ATGGACGGCG TGGCGATTGA ACTTTCAGGC GCAGCTCGGT
GAGCCCTGGT TCATCCTGTT CGGCTGGCCG GTCTATTATC CCCCAGCGTT CTATGCGTGG
TGGTTCTTCT ACGACGCCTA CGCGCCGGCG ATCTTCGTGG AAGGGGCTGT CATCGCAGCA
TCGGGCGGAT TCATGGCGAT CGCTGTCGCG ATCGCCATGT CGGTGTTGCG GGCCCGCGAA
ACCAAGAACG TCGACACCTA CGGTTCAGCA CGATGGGCCC GCCCCGATGA GGTGAAGGGC
GCCGGCCTGC TCGGCCCCGA CGGCGTCGTG CTCGGCAAGC TCGGCCGCGA CTATCTCCGC
CACGACGGCC CCGAGCACGT CCTCTGCTTT GCCCCGACCA GGAGCGGCAA AGGTGTGGGT
TTGGTCATTC CCTCGCTCCT CACTTGGCCG GGGAGCGCCA TCGTCCACGA CATCAAGGGT
GAGAACTGGC AGCTCACGTC GGGATTTCGC GCCCGGCACG GCCGCGTGCT CCTGTTCGAT
CCGACGAACG CCAAGTCTTC TGCCTACAAT CCTCTGCTCG AAGTCCGGCG CGGCGAATGG
GAAGTCCGCG ACGTCCAGAA CATCGCCGAC ATCCTGGTCG ACCCGGAAGG CTCGCTCGAG
AAGAGGAACC ATTGGGAGAA GACCTCTCAT GCGCTGCTGG TCGGCGCCAT CCTCCACGTG
CTCTACGCCG AGGAGGACAA GACGCTCGCC GGCGTCGCCT CCTTCCTCTC CGATCCGCGC
CGACCGATCG AGTCGACGCT CGCCGCGATG ATGAGGACCC CGCATCTGGG AGAGGCCGGA
CCGCACCCGG TCATCGCCAG CGCCGCGCGC GAGCTCCTCA ACAAGTCGGA CAACGAGCGC
AGCGGCGTGT TGAGCACCGC CATGTCCTTT CTCGGCCTCT ACCGCGACCC CGTCGTCGCG
GCCGTCACGC GCCGCTGCGA CTGGCGGATC ACCGATATCG TCGGCGGCGC GCCGCCGACG
ACGCTCTACC TCGTTGTGCC GCCGTCCGAC ATCGCCCGCA CCAAGCCGCT GATCCGGCTG
ATCCTCAACC AGATCGGCCG GCGGCTGACG GAAGATCTCC ATGCGAAGTC CCGCCGTCAC
CGCCTGCTTC TCATGCTCGA CGAGTTCCCC GCACTCGGCC GCCTCGACTT CTTCGAGAGC
GCGCTGGCGT TCATGGCCGG CTATGGGCTG AAGTCGTTCC TGATCGCGCA GAGCCTCAAC
CAGATCGAGA AGGCTTACGG CCCGAACAAC TCGATCCTCG ACAATTGCCA TGTGCGGGTG
AGCTTCGCGA CCAACGACGA GCGCACGGCC AAACGCGTGA GCGACGCGCT CGGCACGGCG
ACCGAGCTCC GCGCCATGCG CAACTACGCC GGCCATCGCC TCAGCCCCTG GCTCGGACAC
CTGATGGTCT CGCGCTCGGA GACGGCCCGG CCGCTGCTCA CGCCCGGCGA GATCATGCAG
CTCCCGCCCA CAGACGAGAT CGTGATGGTC GCCGGCACGC CGCCCATCCG CGCCAAGAAG
GCGCGCTACT TCGAGGACCG GAGATTACAG GCGCGCATCT TGCCGCCGCC GGTGCTGAAG
GCGGCGGAAC ACCATCAAGC GAATGACTGG ACCGGCAGGC CCCTGCCGCC GCAACCTTTG
CCGGAAGCCG CGCCACCCGT GAGCGGCATG AATGACGAGG ATCCGACGGG CTCCGAGAAG
CGGCGCCAGC CCGAGCTCAG TCGCGTGGCC CCGGTCGAGA AGAAGCCGCC GATCGACAAC
GAGTTCGAGA TCGACCCCAA CGATGACGAG CCGGACGATG CCGCACGGCT GAGCCGCATG
AACCGTCTCG TGCAAGGCCT CGCGCGCCAG GTCTCACTCG ATCCCGACGA CGGCATGGAG
CTGTAG
 
Protein sequence
MSATKILWGQ ILVVALIILA TTWGATEWTA WRLNFQAQLG EPWFILFGWP VYYPPAFYAW 
WFFYDAYAPA IFVEGAVIAA SGGFMAIAVA IAMSVLRARE TKNVDTYGSA RWARPDEVKG
AGLLGPDGVV LGKLGRDYLR HDGPEHVLCF APTRSGKGVG LVIPSLLTWP GSAIVHDIKG
ENWQLTSGFR ARHGRVLLFD PTNAKSSAYN PLLEVRRGEW EVRDVQNIAD ILVDPEGSLE
KRNHWEKTSH ALLVGAILHV LYAEEDKTLA GVASFLSDPR RPIESTLAAM MRTPHLGEAG
PHPVIASAAR ELLNKSDNER SGVLSTAMSF LGLYRDPVVA AVTRRCDWRI TDIVGGAPPT
TLYLVVPPSD IARTKPLIRL ILNQIGRRLT EDLHAKSRRH RLLLMLDEFP ALGRLDFFES
ALAFMAGYGL KSFLIAQSLN QIEKAYGPNN SILDNCHVRV SFATNDERTA KRVSDALGTA
TELRAMRNYA GHRLSPWLGH LMVSRSETAR PLLTPGEIMQ LPPTDEIVMV AGTPPIRAKK
ARYFEDRRLQ ARILPPPVLK AAEHHQANDW TGRPLPPQPL PEAAPPVSGM NDEDPTGSEK
RRQPELSRVA PVEKKPPIDN EFEIDPNDDE PDDAARLSRM NRLVQGLARQ VSLDPDDGME
L