Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_7739 |
Symbol | |
ID | 5149751 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 8130541 |
End bp | 8132526 |
Gene Length | 1986 bp |
Protein Length | 661 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640562379 |
Product | conjugal transfer coupling protein TraG |
Protein accession | YP_001243486 |
Protein GI | 148258901 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.477093 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGCAA CGAAGATTCT CTGGGGTCAG ATTCTGGTCG TCGCGCTGAT CATCCTGGCG ACGACCTGGG GCGCCACGGA ATGGACGGCG TGGCGATTGA ACTTTCAGGC GCAGCTCGGT GAGCCCTGGT TCATCCTGTT CGGCTGGCCG GTCTATTATC CCCCAGCGTT CTATGCGTGG TGGTTCTTCT ACGACGCCTA CGCGCCGGCG ATCTTCGTGG AAGGGGCTGT CATCGCAGCA TCGGGCGGAT TCATGGCGAT CGCTGTCGCG ATCGCCATGT CGGTGTTGCG GGCCCGCGAA ACCAAGAACG TCGACACCTA CGGTTCAGCA CGATGGGCCC GCCCCGATGA GGTGAAGGGC GCCGGCCTGC TCGGCCCCGA CGGCGTCGTG CTCGGCAAGC TCGGCCGCGA CTATCTCCGC CACGACGGCC CCGAGCACGT CCTCTGCTTT GCCCCGACCA GGAGCGGCAA AGGTGTGGGT TTGGTCATTC CCTCGCTCCT CACTTGGCCG GGGAGCGCCA TCGTCCACGA CATCAAGGGT GAGAACTGGC AGCTCACGTC GGGATTTCGC GCCCGGCACG GCCGCGTGCT CCTGTTCGAT CCGACGAACG CCAAGTCTTC TGCCTACAAT CCTCTGCTCG AAGTCCGGCG CGGCGAATGG GAAGTCCGCG ACGTCCAGAA CATCGCCGAC ATCCTGGTCG ACCCGGAAGG CTCGCTCGAG AAGAGGAACC ATTGGGAGAA GACCTCTCAT GCGCTGCTGG TCGGCGCCAT CCTCCACGTG CTCTACGCCG AGGAGGACAA GACGCTCGCC GGCGTCGCCT CCTTCCTCTC CGATCCGCGC CGACCGATCG AGTCGACGCT CGCCGCGATG ATGAGGACCC CGCATCTGGG AGAGGCCGGA CCGCACCCGG TCATCGCCAG CGCCGCGCGC GAGCTCCTCA ACAAGTCGGA CAACGAGCGC AGCGGCGTGT TGAGCACCGC CATGTCCTTT CTCGGCCTCT ACCGCGACCC CGTCGTCGCG GCCGTCACGC GCCGCTGCGA CTGGCGGATC ACCGATATCG TCGGCGGCGC GCCGCCGACG ACGCTCTACC TCGTTGTGCC GCCGTCCGAC ATCGCCCGCA CCAAGCCGCT GATCCGGCTG ATCCTCAACC AGATCGGCCG GCGGCTGACG GAAGATCTCC ATGCGAAGTC CCGCCGTCAC CGCCTGCTTC TCATGCTCGA CGAGTTCCCC GCACTCGGCC GCCTCGACTT CTTCGAGAGC GCGCTGGCGT TCATGGCCGG CTATGGGCTG AAGTCGTTCC TGATCGCGCA GAGCCTCAAC CAGATCGAGA AGGCTTACGG CCCGAACAAC TCGATCCTCG ACAATTGCCA TGTGCGGGTG AGCTTCGCGA CCAACGACGA GCGCACGGCC AAACGCGTGA GCGACGCGCT CGGCACGGCG ACCGAGCTCC GCGCCATGCG CAACTACGCC GGCCATCGCC TCAGCCCCTG GCTCGGACAC CTGATGGTCT CGCGCTCGGA GACGGCCCGG CCGCTGCTCA CGCCCGGCGA GATCATGCAG CTCCCGCCCA CAGACGAGAT CGTGATGGTC GCCGGCACGC CGCCCATCCG CGCCAAGAAG GCGCGCTACT TCGAGGACCG GAGATTACAG GCGCGCATCT TGCCGCCGCC GGTGCTGAAG GCGGCGGAAC ACCATCAAGC GAATGACTGG ACCGGCAGGC CCCTGCCGCC GCAACCTTTG CCGGAAGCCG CGCCACCCGT GAGCGGCATG AATGACGAGG ATCCGACGGG CTCCGAGAAG CGGCGCCAGC CCGAGCTCAG TCGCGTGGCC CCGGTCGAGA AGAAGCCGCC GATCGACAAC GAGTTCGAGA TCGACCCCAA CGATGACGAG CCGGACGATG CCGCACGGCT GAGCCGCATG AACCGTCTCG TGCAAGGCCT CGCGCGCCAG GTCTCACTCG ATCCCGACGA CGGCATGGAG CTGTAG
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Protein sequence | MSATKILWGQ ILVVALIILA TTWGATEWTA WRLNFQAQLG EPWFILFGWP VYYPPAFYAW WFFYDAYAPA IFVEGAVIAA SGGFMAIAVA IAMSVLRARE TKNVDTYGSA RWARPDEVKG AGLLGPDGVV LGKLGRDYLR HDGPEHVLCF APTRSGKGVG LVIPSLLTWP GSAIVHDIKG ENWQLTSGFR ARHGRVLLFD PTNAKSSAYN PLLEVRRGEW EVRDVQNIAD ILVDPEGSLE KRNHWEKTSH ALLVGAILHV LYAEEDKTLA GVASFLSDPR RPIESTLAAM MRTPHLGEAG PHPVIASAAR ELLNKSDNER SGVLSTAMSF LGLYRDPVVA AVTRRCDWRI TDIVGGAPPT TLYLVVPPSD IARTKPLIRL ILNQIGRRLT EDLHAKSRRH RLLLMLDEFP ALGRLDFFES ALAFMAGYGL KSFLIAQSLN QIEKAYGPNN SILDNCHVRV SFATNDERTA KRVSDALGTA TELRAMRNYA GHRLSPWLGH LMVSRSETAR PLLTPGEIMQ LPPTDEIVMV AGTPPIRAKK ARYFEDRRLQ ARILPPPVLK AAEHHQANDW TGRPLPPQPL PEAAPPVSGM NDEDPTGSEK RRQPELSRVA PVEKKPPIDN EFEIDPNDDE PDDAARLSRM NRLVQGLARQ VSLDPDDGME L
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