Gene BBta_7653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_7653 
Symbol 
ID5155626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp8050958 
End bp8053162 
Gene Length2205 bp 
Protein Length734 aa 
Translation table11 
GC content68% 
IMG OID640562296 
Productputative penicillin-binding protein pbpC/mrcB-like protein 
Protein accessionYP_001243404 
Protein GI148258819 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID[TIGR02074] penicillin-binding protein, 1A family
[TIGR02071] penicillin-binding protein 1B 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.278881 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGGG GACGGAAACA GGGCGGCGGG CGCAAGGAGC CGCGATTCGG CCTTGCGGCG 
GCGATGGCCG ATCTGCGTCT TGATCCCAAG GACCGCATCC CCGCCGGCGA AGACGCCCCG
AAGAAATCGG CTGCGAAGAA AAAGCCGGTC GAGCCTGACG ACGAGGACGA TGTGCCGGCG
CGCGAGCCCA AGGCCGCACC ACCCAAGCCG AAGCCGAGCC GCGGCCAATC CCGCTGGGGA
TTATCGATCG GACGCATGGC CTATTGGGCG CTGGTCTGCG GCCTGTGGGG GGTGATCGCA
CTGGTCGGGG TGGTCGTCTG GGCCGGTGCG CATCTGCCGC CGATCCAATC ATTGGAGATT
CCCAAGCGCC CGCCGACCAT CGACATCGTC GGTGTCGACG GCACCATGCT GGCCCAGCGC
GGCGAGATGG CCGGCGCCAA TGTCGCGCTG AAGGATCTGC CGCCCTATCT GCCCAAGGCC
TTCATCGCCA TCGAGGACCG CCGCTTCTAC CAGCACTGGG GCATCGATCC GATCGGCATC
GCCCGCGCAC TCGTCGCCAA CATCCTGCAT CGCGGCGTGT CGCAAGGCGG CTCGACCCTG
ACCCAGCAGC TCGCCAAGAA CCTCTTCCTG ACCCAGGAGC GCACGCTGGC GCGCAAGCTG
CAGGAGGCCG AGCTCGCGCT GTGGCTGGAG CGCAAATATT CCAAGCGCGA GATCCTGGAA
CTGTATCTGA ACCGCGTCTA TTTCGGTTCC GGCGCCTATG GCGTCGAGGC CGCGGCACAG
CGCTATTTCG GCAAGTCGGC GAAGCAGGTG ACGATCGGCG AGGCCGCGAT GCTCGCCGGC
CTCGTCAAAT CGCCGTCGCG GCTGGCGCCG AACCGCAACC CCGAAGGCGC CGCCAAACGG
GCGCAGACTG TGCTCGCGGC GATGGCCGAC GCCAAGTTCA TCACCGAGGC CCAGGCCCAG
GCCCAGATCG CGCATCCGTC CGTCGCGGTG AAGCCGGCCG GCGCCGGGAC CGTGAACTAC
GTCGCGGATT GGATCGGCGA GGTGCTCGAC GACCTCGTCG GCCAGATCGA GCAGTCGATC
GTGGTCGAGA CCACGATCGA TCCGAAGCTG CAGGCCGTCG CCGAGGCGGC CGTCATCGAC
GAGCTCGCGG CCAAGAGCGT CAAGTTCAAT GTCAGCCAGG GCGCGCTGGT GGCGATGACG
CCGGACGGCG CAGTGCGCGC CATGGTCGGC GGCCGCAACT ATGCGGACAG CCAGTTCAAC
CGCGCGGTCA CGGCCAAGCG CCAACCCGGC TCGGCGTTCA AGCCATTCGT CTATCTCACC
GCGATCGAGC AGGGCCTCAC CCCCGACACG GTGCGCCAGG ACGCGCCGCT CGATCTGAAG
GGCTGGAAGC CGGAGAACTA CAGCCGCGAA TATTTCGGCC CGGTGACGCT GACCCAAGCC
CTGGCCATGT CGCTCAACAC CGTCGCGGTC CGCGTCGGCC TCGAGGTCGG ACCGAAGAAC
GTGGTGCGGA CCGCGCATCG GCTCGGCATC GCCTCGAAGC TCGATCCCAA CCCGTCGATC
GCGCTCGGCA CGTCGGAAGT GTCGATGATC GAGCTGGTCG GCGCCTATGC GCCGTTTGCC
AATGGCGGCG TCGGCGTGTC GCCGCATGTC GTGACGCGGA TCAAGACGCT CGACGGCAAG
CTGCTCTACA TGCGCCAGAG CGAGCCGCCG GCGCAGGTGA TCGAGCCGCG CAATGCCGCG
ATGATGAACC AGATGATGCA GGAAACGCTG ATCTCGGGCA CGGCCAAGAA GGCCGAGATC
CCCGGCTGGG TCGCCGCCGG CAAGACCGGC ACCAGCCAGG ATTTCCGCGA CGCCTGGTTC
ATCGGCTACA CGGCACGCCT GGTCACCGGC GTCTGGCTCG GCAATGACGA CAATTCGCCG
ACCAAGAAGG CGACCGGCGG TGGCCTGCCG GTCGAGGTCT GGACCCGCTT CATGCGCGCG
GCGCATCAAG GCGTGCCGGT CGCGGCGCTG CCGAATGCGC AGGGCTCCGG GCTCGCGCCG
ACCTTGGCGC AGATCACCTC GCAGATCAGC GCGCCCTCGG CGCCGGGAGC CAATGCAGCC
ACCACCGCGC GGGCCGCGCC TTCGGGTCGC GGCACGACAC GGCCCGAAGC GGCCGCCGGG
CTCGACGGCT GGCTGGTGGA CCGGTTGTTT GGTGGTCAGC GCTAG
 
Protein sequence
MARGRKQGGG RKEPRFGLAA AMADLRLDPK DRIPAGEDAP KKSAAKKKPV EPDDEDDVPA 
REPKAAPPKP KPSRGQSRWG LSIGRMAYWA LVCGLWGVIA LVGVVVWAGA HLPPIQSLEI
PKRPPTIDIV GVDGTMLAQR GEMAGANVAL KDLPPYLPKA FIAIEDRRFY QHWGIDPIGI
ARALVANILH RGVSQGGSTL TQQLAKNLFL TQERTLARKL QEAELALWLE RKYSKREILE
LYLNRVYFGS GAYGVEAAAQ RYFGKSAKQV TIGEAAMLAG LVKSPSRLAP NRNPEGAAKR
AQTVLAAMAD AKFITEAQAQ AQIAHPSVAV KPAGAGTVNY VADWIGEVLD DLVGQIEQSI
VVETTIDPKL QAVAEAAVID ELAAKSVKFN VSQGALVAMT PDGAVRAMVG GRNYADSQFN
RAVTAKRQPG SAFKPFVYLT AIEQGLTPDT VRQDAPLDLK GWKPENYSRE YFGPVTLTQA
LAMSLNTVAV RVGLEVGPKN VVRTAHRLGI ASKLDPNPSI ALGTSEVSMI ELVGAYAPFA
NGGVGVSPHV VTRIKTLDGK LLYMRQSEPP AQVIEPRNAA MMNQMMQETL ISGTAKKAEI
PGWVAAGKTG TSQDFRDAWF IGYTARLVTG VWLGNDDNSP TKKATGGGLP VEVWTRFMRA
AHQGVPVAAL PNAQGSGLAP TLAQITSQIS APSAPGANAA TTARAAPSGR GTTRPEAAAG
LDGWLVDRLF GGQR