| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7208 |
|---|
| Symbol | |
|---|
| ID | 5154533 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 7568002 |
|---|
| End bp | 7568883 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640561883 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001242994 |
|---|
| Protein GI | 148258409 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.319627 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTCA GGACGCTCAG GGCCTTCGTC GAGGTCGTCC GCCAAGGCGG TTTCTCGCAG
GCCGCCAAGG TGGTCTTCGC GACCCAGTCG ACCGTCAGCA AGGCGGTCAA GCAGCTTGAG
GACGAACTCG GTCTGCCCCT GCTGGACCGG CTCGGCCATA AGAGCCGCAT GACCGCGGCC
GGGGAGATCG TCTATCGCCG CGCGATCCGG CTGCTTGCCG AACGAGACGA CCTGCAGGCG
GAGCTTGAGG AACTCAAGGG ATTGAAGCGG GGCGTGCTGC GGCTCGGCCT GCCGCCGATC
GGCTCCAGCA CACTGTTCGC GCCGCTGTTT GCGCTGTATC GCCAGCTTTA TCCCGATATC
GAGATCCGGC TGGTCGAGCA CGGCAGCGAC CGCCTCAGCG AGTTGCTCGC CGCCGGTGAA
ATCGACTTCG CAGGCCTGCT GCCGCCGATC GCCGATGAGT TCGCGGCCCA GGTGGTACGC
CGAGAGCCGC TGATGGCCCT GGTCTCGGTC GATCATCCGC TGGCACAGCG TGACGCCGTG
ACGTTGGCCG ATTTGCGCGA GACTCCGTTC GTGCTGTTCG AAGCCGGCTT CGCGCTCAAC
CGGATCATCC GCGAGGCCTG TCGCCGCAAC GGCTTCGAGC CAGTGGTGGC GGCGCGCAGC
ACCCAGATCG ACTTCATCGC CGAGCTTGCC GGCGCTGGAC TCGGCATCGC CTTCCTGCCG
CGCATGATTG CGACCCAGCG CACGCAGGTG CCGATCAGTC TCGTCCTGCT CGACGAGCCG
GGTACGGAAT GGACCCTGTC GATGGCTTGG CGCCGCGGCG CCTATCTGTC GCCCGCGGCC
GCGGCTTGGC TCAGACTGGT CCGCGAACGC GGCGAGGCGT GA
|
|---|
| Protein sequence | MELRTLRAFV EVVRQGGFSQ AAKVVFATQS TVSKAVKQLE DELGLPLLDR LGHKSRMTAA
GEIVYRRAIR LLAERDDLQA ELEELKGLKR GVLRLGLPPI GSSTLFAPLF ALYRQLYPDI
EIRLVEHGSD RLSELLAAGE IDFAGLLPPI ADEFAAQVVR REPLMALVSV DHPLAQRDAV
TLADLRETPF VLFEAGFALN RIIREACRRN GFEPVVAARS TQIDFIAELA GAGLGIAFLP
RMIATQRTQV PISLVLLDEP GTEWTLSMAW RRGAYLSPAA AAWLRLVRER GEA
|
|---|
| |