Gene BBta_7194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_7194 
Symbol 
ID5154768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp7553253 
End bp7554134 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content65% 
IMG OID640561869 
ProductABC transporter permease 
Protein accessionYP_001242980 
Protein GI148258395 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1176] ABC-type spermidine/putrescine transport system, permease component I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAGCG CCACGACAGC AAGCGCGACA GCTCCTGGCG ACGTGACCAG CTTCAGCCTG 
GGGCTCGCGC TGCCCTTGGG GGTGGTGTTC GCGATCTTCT TCGTGCTGCC GCTGGCGCAA
TTGTTCTATC TGTCGCTGCA CAACGACACC GCGGCCACGG TGTGGGGGCT CGGCCAGTAC
ATCAAGTTCC TGAGCGATCC CTTCAGCCTC GCGGTGCTCG GCTCGACCCT GCTGCTGGGC
GCCGAGGTGA CGCTCGCCTG CCTCGTGCTC GGCTATCCGA TCGCCTGGCT GTACCAGCGC
TCCGGCAGTC GGGTGCAGAC CCTGATCATC ATGATCGTGC TGCTGCCGCT GCTCACCAGC
GTCGTCGTCC GCACCTTCGC CTGGATCGTG ATCCTCGGAC GACAGGGCAT CATCAACTCG
GTGCTGCAGT CGCTCGGCCT GATCGGCACG CCGCTGCGCA TGATCTACAC GCAGGGCGGA
TTGATCGCCG CGCTGGCCCA GGTGCAGATG CCGCTGATGG TGCTGCCCTT GATCACCGCG
ATCGGCCGCA TCGATCCCAA TCTTGCCGAC GCCTCGGCCT CGCTCGGCGC CGGCAGCTGG
CGCACCTTCG TCAAGGTGAT GCTGCCGCTG TCGATGCCCG GCATCATCGC GGGCTGCACC
TTGACCTATG CCGCGGCGAT CACCGCCTTC ATCACCCAGT CGCTGATCGG CGGCGGCCAG
ATGCTGTTCA TGCCGATGTA TCTCTATCAG CAGGCCTCGA CGTTGCAGAA CTGGCCGTTT
GCGGCTGCGA TCTCGATCAT CTTCCTGTTC GCGGTGCTCG CCATCGTCGC GCTGTTCTCG
ATGCTCGGGC GGCGCGCCCG TGGCTATGGA GACGCCCGAT GA
 
Protein sequence
MKSATTASAT APGDVTSFSL GLALPLGVVF AIFFVLPLAQ LFYLSLHNDT AATVWGLGQY 
IKFLSDPFSL AVLGSTLLLG AEVTLACLVL GYPIAWLYQR SGSRVQTLII MIVLLPLLTS
VVVRTFAWIV ILGRQGIINS VLQSLGLIGT PLRMIYTQGG LIAALAQVQM PLMVLPLITA
IGRIDPNLAD ASASLGAGSW RTFVKVMLPL SMPGIIAGCT LTYAAAITAF ITQSLIGGGQ
MLFMPMYLYQ QASTLQNWPF AAAISIIFLF AVLAIVALFS MLGRRARGYG DAR