Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_7194 |
Symbol | |
ID | 5154768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 7553253 |
End bp | 7554134 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640561869 |
Product | ABC transporter permease |
Protein accession | YP_001242980 |
Protein GI | 148258395 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGAGCG CCACGACAGC AAGCGCGACA GCTCCTGGCG ACGTGACCAG CTTCAGCCTG GGGCTCGCGC TGCCCTTGGG GGTGGTGTTC GCGATCTTCT TCGTGCTGCC GCTGGCGCAA TTGTTCTATC TGTCGCTGCA CAACGACACC GCGGCCACGG TGTGGGGGCT CGGCCAGTAC ATCAAGTTCC TGAGCGATCC CTTCAGCCTC GCGGTGCTCG GCTCGACCCT GCTGCTGGGC GCCGAGGTGA CGCTCGCCTG CCTCGTGCTC GGCTATCCGA TCGCCTGGCT GTACCAGCGC TCCGGCAGTC GGGTGCAGAC CCTGATCATC ATGATCGTGC TGCTGCCGCT GCTCACCAGC GTCGTCGTCC GCACCTTCGC CTGGATCGTG ATCCTCGGAC GACAGGGCAT CATCAACTCG GTGCTGCAGT CGCTCGGCCT GATCGGCACG CCGCTGCGCA TGATCTACAC GCAGGGCGGA TTGATCGCCG CGCTGGCCCA GGTGCAGATG CCGCTGATGG TGCTGCCCTT GATCACCGCG ATCGGCCGCA TCGATCCCAA TCTTGCCGAC GCCTCGGCCT CGCTCGGCGC CGGCAGCTGG CGCACCTTCG TCAAGGTGAT GCTGCCGCTG TCGATGCCCG GCATCATCGC GGGCTGCACC TTGACCTATG CCGCGGCGAT CACCGCCTTC ATCACCCAGT CGCTGATCGG CGGCGGCCAG ATGCTGTTCA TGCCGATGTA TCTCTATCAG CAGGCCTCGA CGTTGCAGAA CTGGCCGTTT GCGGCTGCGA TCTCGATCAT CTTCCTGTTC GCGGTGCTCG CCATCGTCGC GCTGTTCTCG ATGCTCGGGC GGCGCGCCCG TGGCTATGGA GACGCCCGAT GA
|
Protein sequence | MKSATTASAT APGDVTSFSL GLALPLGVVF AIFFVLPLAQ LFYLSLHNDT AATVWGLGQY IKFLSDPFSL AVLGSTLLLG AEVTLACLVL GYPIAWLYQR SGSRVQTLII MIVLLPLLTS VVVRTFAWIV ILGRQGIINS VLQSLGLIGT PLRMIYTQGG LIAALAQVQM PLMVLPLITA IGRIDPNLAD ASASLGAGSW RTFVKVMLPL SMPGIIAGCT LTYAAAITAF ITQSLIGGGQ MLFMPMYLYQ QASTLQNWPF AAAISIIFLF AVLAIVALFS MLGRRARGYG DAR
|
| |