| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7141 |
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| Symbol | |
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| ID | 5153733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 7486498 |
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| End bp | 7488246 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640561818 |
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| Product | HlyB family ABC transporter |
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| Protein accession | YP_001242929 |
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| Protein GI | 148258344 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4618] ABC-type protease/lipase transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR01842] type I secretion system ABC transporter, PrtD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.470411 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCCCC CATTCGGCAC CGGACCTTCC GAGCTTCGCG ACGCATTGAG GGGCTGCCGC
AGCGCCTTCA TCGGCGTCGG ACTGATGAGT TGCGTCGTCA ACCTGCTGTA TCTGACCGGC
TCGATCTTCA TGCTCGAGGT CTACGACCGG GTGCTGCCGA GCCGGAGTGT GCCGACCCTG
ATCGGCCTCA TCATCATCGC CGCCGGCCTG TATGTCGCGC AGGGCGCGCT CGACATGATC
CGCAGCCGCA TCCTCGGGCG GATCGGGACG GCGTTGGACG AAAGCCTGAA TGCGCGGGTG
TTCGATACGG TGGTGCGCTT GCCGCTGGCG GTCGGCGGCC GCAACGAGGG ACTGCAGCCG
TTGCGCGATC TCGACAACAT CCGGAGCTTT CTCGGCAGCC AGGGGCCCGG CGCGTTCTTC
GATCTGCCGT GGCTGCCGCT CTACCTCGCG ATCTGTTTCG CCTTTCACGT CCTGCTCGGC
GTCACCGCGC TGGTCGGCGC TGTCATTCTG GTGACACTGA CCCTGGTCAC GGAGTTCCTC
ACCCGGACCC CGGCCAAGGA GGCGATGGGA CTCGCTGCCC GCCGCAACGA TCTCGCCACC
GCCAGCCGTC GCAACGCCGA AGTGCTGGTC GCGATGGGCA TGGCCGGGCG GATGATGCAG
CGCTGGAGCG AGACCAACGA TCGATATCTC GCCGGCAACC AGCGCGCCAG CGATGTGGCC
GGCGGCCTCG GCGCGATCGC CAAGGTGCTG CGCATGATGC TGCAATCGGC GGTCCTTGCG
GTCGGCGCCT ATCTGGTGAT TCACCAGGAG GCTACCGCCG GTATCATCAT CGCCGGTTCG
ATCCTGAGCG CGCGGGCGCT GGCTCCGGTC GATCTCGCGA TCGCGCATTG GAAAAGCTTC
GTGGCGGCGC GCCAGAGCTG GCACCGCCTC AGCCAGCTGC TGCACACCAT GCCAGCGCGT
CCCACGCCGA CCTTGCTGCA GCCGCCGGTC AGCAAGCTCT CGGTCGAGAG CATCTCGATC
GTGGCGCCGG GCGACCAGAA GCTGATCGTG CAGGACGTCA CCTTTGCGCT CTCGGCCGGC
AATGGCCTCG GCATCATCGG GCCGAGCGCC TCGGGCAAAT CCTCGCTGGT GCGGGCGCTG
GTCGGTGTGT GGCGTCCGGT GCGCGGCCAT GTCCGGCTTG ACGGTGCGGC GCTGGATCAA
TGGTCCTCGG ACGAGCTCGG CCGGCATATC GGCTATCTGC CGCAGGATGT CGAACTGTTC
GCCGGAACGG TGACCCAGAA CATCAGCCGC TTCGATCCGC ACGCCTCCGC CGATGCCGTC
ATCGCCGCGG CAAAGGAAGC CGGCGTCCAC GACATGATCA TCAAGATGCG CGAGGGCTAC
GACACCCAGG TCGGCGAGCA GGGCGCGGCG CTCTCGGCGG GACAGGCGCA GCGGGTGGCG
CTGGCGCGCG CCCTTTACGG CAAGCCGTTC TTGATCGTTC TCGACGAGCC GAACTCGAAT
CTCGATACTG AGGGCGACGA GGCCCTGTCG CGCGCGGTGC GCTCGGCGCG TGCGCGCGGG
GCCATTGTCA TCGTCGTCGC ACACCGGCCG ATCGGCATCG AGGCGGTCGA TCAGGTGCTG
GTGATGAAGG ATGGCCGGAT GCAGGCGTTC GGTGCCAAGG AAACGGTGCT CGCGCAGGTC
CTGCAGCCAC GCGGCGCGCC GCCGTCGCCG ATCAAGATCG TCTCCGAGGC AGGGGTCGCC
AAGTCATGA
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| Protein sequence | MLPPFGTGPS ELRDALRGCR SAFIGVGLMS CVVNLLYLTG SIFMLEVYDR VLPSRSVPTL
IGLIIIAAGL YVAQGALDMI RSRILGRIGT ALDESLNARV FDTVVRLPLA VGGRNEGLQP
LRDLDNIRSF LGSQGPGAFF DLPWLPLYLA ICFAFHVLLG VTALVGAVIL VTLTLVTEFL
TRTPAKEAMG LAARRNDLAT ASRRNAEVLV AMGMAGRMMQ RWSETNDRYL AGNQRASDVA
GGLGAIAKVL RMMLQSAVLA VGAYLVIHQE ATAGIIIAGS ILSARALAPV DLAIAHWKSF
VAARQSWHRL SQLLHTMPAR PTPTLLQPPV SKLSVESISI VAPGDQKLIV QDVTFALSAG
NGLGIIGPSA SGKSSLVRAL VGVWRPVRGH VRLDGAALDQ WSSDELGRHI GYLPQDVELF
AGTVTQNISR FDPHASADAV IAAAKEAGVH DMIIKMREGY DTQVGEQGAA LSAGQAQRVA
LARALYGKPF LIVLDEPNSN LDTEGDEALS RAVRSARARG AIVIVVAHRP IGIEAVDQVL
VMKDGRMQAF GAKETVLAQV LQPRGAPPSP IKIVSEAGVA KS
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