| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7121 |
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| Symbol | hadh2 |
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| ID | 5151903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 7464318 |
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| End bp | 7465076 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640561798 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase (short-chain) |
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| Protein accession | YP_001242909 |
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| Protein GI | 148258324 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.678944 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGTTGA ACAATGTTGC CGTTCTCATC ACCGGCGGTG GCTCGGGTCT CGGCGCCGCC
ACGGCACGCG CCATGGCGGC CAAGGGGGCC AAGGTGGCCG TGCTCGATCA GAGCCTGGAG
AATGCCGAGA AGGTCGCCGC CGAGATAAAG GGCGTCGCCT TGCATGCCGA CGTCACCAAT
GAGGACCAGG TCAAGGCCGG CATCGCCAAG GCCGAGGCCG CGCACGGCAT CGCCCGCGTG
CTCGTGAACT GCGCCGGCAT CGGCGGCTCG CAGCGCATCG TCGGCAAGGA CGGCGTCTAT
CCGCTCGCCA AGTTCGCCCG CATCATCAAC GTCAACCTGA TCGGCACCTT CAATGTGCTG
CGGCTGTTTG CGGAGCGCCT GGTTACCGCC GAGCCGATCG GCGAAGAGCG TGGCGTTGCC
ATCAACACCG CCAGTGTTGC GGCCTATGAA GGCCAGATCG GCCAGATCGC CTATTCGGCG
TCGAAGGGCG GCGTCGTAGG CCTGACGCTG CCGGCCGCGC GCGATCTCGC CAGCCAGAAG
ATCCGCGTCA ACACCATCGC GCCCGGCCTG TTCCTGACGC CGCTGCTGAT GGGTCTGAAC
GAAGAAGCCC GCAAGAGTCT CGGCGCCCAG GTGCCGCATC CGGCCCGTCT CGGTGATGCT
TCGGAATACG GCAACCTTGC GGTCCACATC GTCGAAAACC CGATGCTGAA CGGCGAAACC
ATCCGTCTCG ACGGCGCCAT CCGCATGGCG CCGCGCTAG
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| Protein sequence | MQLNNVAVLI TGGGSGLGAA TARAMAAKGA KVAVLDQSLE NAEKVAAEIK GVALHADVTN
EDQVKAGIAK AEAAHGIARV LVNCAGIGGS QRIVGKDGVY PLAKFARIIN VNLIGTFNVL
RLFAERLVTA EPIGEERGVA INTASVAAYE GQIGQIAYSA SKGGVVGLTL PAARDLASQK
IRVNTIAPGL FLTPLLMGLN EEARKSLGAQ VPHPARLGDA SEYGNLAVHI VENPMLNGET
IRLDGAIRMA PR
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