| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7078 |
|---|
| Symbol | |
|---|
| ID | 5152807 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 7422524 |
|---|
| End bp | 7423402 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640561756 |
|---|
| Product | putative high-affinity branched-chain amino acid transport system permease protein livH |
|---|
| Protein accession | YP_001242867 |
|---|
| Protein GI | 148258282 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.666733 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCTTT TCACCAACCA GGTCCTGGCC GGAATCGCGA CCGGTGCGAT CTATGCCTGC
ATGGCGCTCG CGGTCGTGAT GATCTACCAG GCGATCGACC ATCTCAACTT CGCGCAAGGC
GAGATGGCGA TGTTCTCGAC CTTCGTGTCG TGGCAGCTGA TGCAATGGGG CGTGCCCTAT
TGGGGCGCCT TCGTGCTCAC CTTGGCGTTC TCCTTCGCTG GCGGCATCGT CATCGAGCGG
GTGCTGTTCA AGCCGCTGGC GAAGGCGCCG ATCCTGACCC AGGTCGCCGG CTTCATCGCG
CTGTTCTCGA TCATCAACTC CTGCGCCGGG CTGATCTGGG ACTTCACGAT CAAGCAATAT
CCGACGCCGT TCGGCTCGAC ACCGTTCCTC GGCAGCCAGC TGATCTCGAC CCATCAAGCG
GGCATGATCG GCATCACGGT GCTGCTGCTG ATCGGGCTCT ACGTGTTCTT CCAGTACACC
CGCATCGGCC TGGCGATGCG GGCGGCGGCC TCGGTTCCTG AATCCGCGCG GCTCGTCGGC
ATCAACACCT CCTGGATGAT CGCGCTCGGC TGGGGCATGG CGGCGGCGAT CGGCTCGATC
GCCGGCATGC TGATCGCGCC CGTCGTCTTC CTCGAGCCCA ACATGATGGG CGGCGTCCTG
ATCTACGGCT TCGCCGCGGC GGTGCTGGGG GGCCTCACCA GCCCGTTCGG CGCCGTGCTC
GGCGGCTTCC TGGTCGGCAT CTTCGAGAAC CTCGCCGGCA CCTACATCCC TCATGTCGGT
AATGAGATGA AGCTCCCGAT CGCACTGGCG CTGATCATCA CCGTCCTGGT CGTCAAACCC
GCCGGTCTGT TCGGCCGCAA CATCGTGAAG CGAGTCTGA
|
|---|
| Protein sequence | MELFTNQVLA GIATGAIYAC MALAVVMIYQ AIDHLNFAQG EMAMFSTFVS WQLMQWGVPY
WGAFVLTLAF SFAGGIVIER VLFKPLAKAP ILTQVAGFIA LFSIINSCAG LIWDFTIKQY
PTPFGSTPFL GSQLISTHQA GMIGITVLLL IGLYVFFQYT RIGLAMRAAA SVPESARLVG
INTSWMIALG WGMAAAIGSI AGMLIAPVVF LEPNMMGGVL IYGFAAAVLG GLTSPFGAVL
GGFLVGIFEN LAGTYIPHVG NEMKLPIALA LIITVLVVKP AGLFGRNIVK RV
|
|---|
| |