Gene BBta_6950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6950 
Symbol 
ID5155385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp7283701 
End bp7285686 
Gene Length1986 bp 
Protein Length661 aa 
Translation table11 
GC content67% 
IMG OID640561632 
Productputative methyl-accepting chemotaxis receptor/sensory transducer 
Protein accessionYP_001242743 
Protein GI148258158 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein
[COG4564] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCAGC CGCGCTTCTC GCTTGCCCTC CGTCTCTACG CGATCATCGG GCTCTCCTTC 
TGCGGGCTCG CCGGCCTCGC CGCGACGCAA AGCCAAAATC TCGCCACGGC TCTGCAGGAG
CAGCGGCAGA GCGAGCTCGC GCATCTGACC CAGACCGCGC TCAGCATCGC GCGCGAGGAG
TATGACGCGA TCGCGCGCGA CAAGGTGGCC CCCGACGTCG CGCAGAAGAA GGCCGCCGAG
CGGATCGGCA AGCTGCGCTA TGGCAGCGGC GACTACTTCT GGATCAACGA CATGGGTCCG
AAGATGGTGA TGCACCCGGT CAAGCCGGAG CTGAATGGCC AGAACCTCGC CGACAACAAG
GATCCGAACG GCAAACGGCT GTTCATGGAG ATGGTCGATG TCGTCAAGCG CCAGGGCGCC
GGTGTCGTCG ACTACATGTG GCCGAAGCCC GGCAAGGACG CGCCGCAGCC CAAGCTGTCC
TACGTCGCCG GCTTCGAGCC CTGGGGCTGG ATCATCGGCA CCGGCGTCTA TGTCGACGAT
CTCGAAGCGC AGATGTGGGA GAGCAAGCGC GGCGTGTTCA TCGCCGCCAT GCTGGTGATG
CTGATCATCG GGTCGATCAC TCTGATCATC GCGCGGCGGA TGTCGTCGGC GCTCGCCTCC
ATGAGCGGCG CGCTGACCGA GCTCGGCCAC GGCAATTTCG AGATCAAGCT ACCCGGCCTC
AGCCGCAGCG ACGAGCTCGG CGACATGGCG CGCTCGATCG AGCAGTTCAG GCAGAAGACC
GAGGAGAAGG CGCGACAGAC GGCGATGCTC GAGGACGAGC AGCGCCAGGT CGCCGAGCGG
ATCAAGAGCA AGGCTTTGCA GGAGATGGCC GAGGCGGTCG AGCACGCCGC CAGCACGGCG
GTCGGCGAGG TCGCCGAAGG GACGGGCCAT ATGGCCAACA ACGCCAAGTC GATGACGGAG
AGCACGCTGA CGCTGGAGCG GAATTCCAGC AGCGTCGCCG CTGCGGCCGA GCAGGCGCTG
GCCACGACGC AGACCGTGGC CAAGGCGTCG TCGCAGCTCG CCGCGTCGAT CGCGCAGATC
TCCAGCCAGG TCAGCGCGTC GCGCGAGCTC ACGCGCAAGG CGGTCGCGAC CTCGTCAGAG
GCCCAGGCGA CGATCGCGAA ACTGTCCGAG GCCGCCGACA AGGTCGGCGC CGTGACCAGT
CTGATCAGCG AGATCGCGGG CCAGACCAAC CTGCTGGCGC TGAACGCGAC CATCGAGGCC
GCCCGCGCCG GCGATGCCGG CCGCGGCTTC GCCGTCGTGG CCTCCGAGGT CAAGTCGCTC
GCCGAGCAGA CCGCGAAGGC GACCAGCGAG ATCGCGCAGC AGATCGCCGA GATCCAGGAG
TCGACGCGCG CCTCGGTCTC GTCGATCGGC GCCATCGGCG AAGTCATCCG CAATGTCGAA
ACGGTGTCCA CCGGCATTGC CGATGCGATC CAGGCGCAAA ACAGCGTGAC CATGGAGATT
TCGCGTACAG TCGAGGAGAC CTCGGCCGCG GCACGCGAGG TCGCAACCCA GATCGCGGAG
GTCTCGCGCG AGGCCAGCGA GGCCGGCCGG CGCTCGACCG ATATCCGTGA CGGCTCGACC
AATGTCGCCG ACAAGGTGCA GCGGCTTCGC ACCGAGCTGG TGCGGGTGAT CCGGACCTCG
ACCGCCGATG TCGATCGCCG CCTGTCGACG CGCCTGAACA TCAACCGCCC AGGTACGCTG
CAGGTGAATG GCGCACCCAT TGCAGTGACC GTGCGCAACC TGTCGCTCGG CGGCGCGCTG
CTTGAGCAGA TTCCGGTCCA GCTGTCGATC AACACGCCGG TCGCGCTCGG AATCACCGGC
ATGGTGTCGG ATTTGCCGGG CACCGTGACC CGCGTCAGCG ATCGCACGGC CCTGGTCCAG
TTCACACTGA ACACGGAGCA GGCGGCGCGC CTGACGGCGC TGATCTCCGA TCGTCAGGCC
GCCTGA
 
Protein sequence
MAQPRFSLAL RLYAIIGLSF CGLAGLAATQ SQNLATALQE QRQSELAHLT QTALSIAREE 
YDAIARDKVA PDVAQKKAAE RIGKLRYGSG DYFWINDMGP KMVMHPVKPE LNGQNLADNK
DPNGKRLFME MVDVVKRQGA GVVDYMWPKP GKDAPQPKLS YVAGFEPWGW IIGTGVYVDD
LEAQMWESKR GVFIAAMLVM LIIGSITLII ARRMSSALAS MSGALTELGH GNFEIKLPGL
SRSDELGDMA RSIEQFRQKT EEKARQTAML EDEQRQVAER IKSKALQEMA EAVEHAASTA
VGEVAEGTGH MANNAKSMTE STLTLERNSS SVAAAAEQAL ATTQTVAKAS SQLAASIAQI
SSQVSASREL TRKAVATSSE AQATIAKLSE AADKVGAVTS LISEIAGQTN LLALNATIEA
ARAGDAGRGF AVVASEVKSL AEQTAKATSE IAQQIAEIQE STRASVSSIG AIGEVIRNVE
TVSTGIADAI QAQNSVTMEI SRTVEETSAA AREVATQIAE VSREASEAGR RSTDIRDGST
NVADKVQRLR TELVRVIRTS TADVDRRLST RLNINRPGTL QVNGAPIAVT VRNLSLGGAL
LEQIPVQLSI NTPVALGITG MVSDLPGTVT RVSDRTALVQ FTLNTEQAAR LTALISDRQA
A