Gene BBta_6948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6948 
Symbol 
ID5155383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp7280726 
End bp7281205 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content68% 
IMG OID640561630 
ProductMarR family transcriptional regulator 
Protein accessionYP_001242741 
Protein GI148258156 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.17806 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAAGA GCGTGAACGC CGGCGCACAA CGTGACGCCG CGAAGCCGAG CGGGGAGATC 
GGGCTCGGCG AGCTCGAGAA CCATCTCGGC TATTTCGTTC GTCGTCTCCA GCATTGGATC
TTCCGCGACG TCAATGCGGC GCTCGCGGCG GTGGAGCTCG ACGTCATCCT GTATTCCATC
CTGGAGACGA TCGCGGCCAA TCCAGGCACC ACGCAGATCG CGGTCGCCGG CGCGCTCGGC
ATCGAGCGTG CCCGGATGGT CGGGCTGCTC GACGATCTGC AACAGAGCGG CCTGATCGTG
CGCGAGCGCT CCGAGCAGGA CCGCCGGGCG CACGCGCTCG GCCTGACGCC GCGCGGCCGC
CTGATCCTGA AGAAGGCCAA CGCCCTCGTG GCCGCCCACG AAAAGCGGGT GGCTGTCCGG
CTCGGCGCCG GCAATTATCG CCGCGCTCTG ACGGCGCTGT CGCAGTTCGA GATGGATTGA
 
Protein sequence
MSKSVNAGAQ RDAAKPSGEI GLGELENHLG YFVRRLQHWI FRDVNAALAA VELDVILYSI 
LETIAANPGT TQIAVAGALG IERARMVGLL DDLQQSGLIV RERSEQDRRA HALGLTPRGR
LILKKANALV AAHEKRVAVR LGAGNYRRAL TALSQFEMD