Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_6935 |
Symbol | |
ID | 5150664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 7266314 |
End bp | 7267447 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640561617 |
Product | AcrB/AcrD/AcrF family mulitdrug efflux protein |
Protein accession | YP_001242728 |
Protein GI | 148258143 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.532768 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.737034 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | CTGGCCGGCT GTAACGAAGC TACGCAGGCT CAGGCGTCCG CCAACGAACA GGCCGTCGTT CCCGACGTGG GCATCGTCAC CGTCGAGCAG AAGCCGCGCG CGATCGTGCG CGAGCTGCCC GGCCGCATTG CGCCGACCCG CGTCTCCGAC GTTCGGCCGC GGGTGTCGGG CATCGTCGTC GAGCGGCTGT TCCGCCAGGG CAGCGAGGTC AGGGCAGGCG ATCCGCTGTA CCGGATCGAC CCGAAGCCCT TCGAGGTGGA AATCATGTCG GGCCGTGCGG CGCTGGCGAA GGCCGAGGCG GTGCATGAGC GCGCCGTGCA GCAGGCGCGC AGGATCAACC TGCTGTTCAA GGAGCGCGCC GCGCCCGAGG TCGAGCATGA GAAGGCGATC GCGAGCGAGC GCGAGGCGGC GGCCGATGTC GAGGCCCGCA AGGCGGATCT CGCGCGTGCC CAGCTCAATC TCGACTACGC GACGGTGCGT GCGCCGATCG ACGGCATCGT CGGCGCCGCG CAGGTCAGCG AAGGCGCCAT CGCGGTCCAG AACGAGACCT CGCTCGCGAC CATCCAGCAG CTCGATCCGA TCTATGCCGA CTTCACCCAG TCGGTCAGCG AGCTCAACCG CCTGCGCCGC GCCTTCGAGT CCGGCGATCT CGACCAGATC GCGCCGGACG CGATCAAGGT CCGGCTCGTG CTCGATGACG GCACGTCGTA TTCGATTCCG GGCAAGCTGC TGTTCTCCGA TGCCAAGGTC GACGCTGCCA CCGGCCAGGT CACGTTGCGG GGCGAGTTCG CCAATCCGAA ACGCGAGCTG CTGCCGGGCA TGTATGTGCG CGTGCGTATC GAGCAGGGCA TCGACAGCGA TTCCGTCGCG GTGCCGCAGC AGGCGGTGCA GCGGAACGCC GCCGGCGGGT CCGAGGTCTA CGTCATCCGC GAGGACAACC GCGCGATCGC GCGGCCGATC CGCACGGGTC CGATCCAGGA CGGTCTGGTG CTGGTTACCG ACGGCCTCAG GGCCGGCGAC CGGGTGGTGG TCGACGGCTT CCAGAAATTC GCCGCCGGCG ACAAGGTGGC CCCGCAGGCC TGGACCGAGG CCAGCGCCGC GGCTCAGATC GAGCCGAACG CGACGCCGCG TTAG
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Protein sequence | MAGCNEATQA QASANEQAVV PDVGIVTVEQ KPRAIVRELP GRIAPTRVSD VRPRVSGIVV ERLFRQGSEV RAGDPLYRID PKPFEVEIMS GRAALAKAEA VHERAVQQAR RINLLFKERA APEVEHEKAI ASEREAAADV EARKADLARA QLNLDYATVR APIDGIVGAA QVSEGAIAVQ NETSLATIQQ LDPIYADFTQ SVSELNRLRR AFESGDLDQI APDAIKVRLV LDDGTSYSIP GKLLFSDAKV DAATGQVTLR GEFANPKREL LPGMYVRVRI EQGIDSDSVA VPQQAVQRNA AGGSEVYVIR EDNRAIARPI RTGPIQDGLV LVTDGLRAGD RVVVDGFQKF AAGDKVAPQA WTEASAAAQI EPNATPR
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