Gene BBta_6924 details

Gene Information

• Locus tag: BBta_6924
• Symbol: recQ
• ID: 5150548
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bradyrhizobium sp. BTAi1
• Kingdom: Bacteria
• Replicon accession: NC_009485
• Strand: +
• Start bp: 7252431
• End bp: 7254308
• Gene Length: 1878 bp
• Protein Length: 625 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 640561606
• Product: ATP-dependent DNA helicase RecQ
• Protein accession: YP_001242717
• Protein GI: 148258132
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0514] Superfamily II DNA helicase
• TIGRFAM ID: [TIGR00614] ATP-dependent DNA helicase, RecQ family; [TIGR01389] ATP-dependent DNA helicase RecQ

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 27
• Fosmid unclonability p-value: 0.286849
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCCTCAG CCCCCAACGC CACGACCGAT ACGGCCGATC GCGCGCTGGC CGTGCTGCAT 
TCGGTGTTCG GGCTGCCGGG CTTTCGCGGC GCGCAGGAGA AGGTGGTCCG GCATGTCACC 
GCGGGCGGCA ATTGCCTGGT GCTGATGCCG ACCGGCGGCG GCAAGTCGCT GTGCTATCAG 
CTGCCGGCGC TGCTGCGCAA AGGCTGCGGA ATCGTCGTCT CGCCGCTGAT TGCCTTGATG 
CGCGACCAGG TCGCCGGGCT GACCGAGGCG GGCGTCAATG CCGCGGTGCT GAACTCGACG 
CTGTCGCGCG AGGAGGCCGA CGAGGTCGAG CGGCGGCTCA TCGCCGGCGA TCTCGATTTA 
CTTTACGTCG CGCCGGAGCG GCTGGTGACG CCGCGCTGCC TGGCGCTGCT GGAGCGCGCT 
GACATCGCGT TGTTCGCGAT CGACGAGGCG CATTGCGTGT CGCAATGGGG GCACGATTTC 
CGCCCGGAAT ATATCGGCCT GTCGATCATT GCCGAACGCT TCCCCGAGGT GCCGCGCATC 
GCGCTGACCG CGACCGCCGA CGAGCTGACG CGCAAGGAGA TCGCCGAACG GCTCGGCCTC 
ACCGACGCAC CGCAATTCGT CGCGAGCTTC GACCGCCCGA ACATCCGCTA CGAGATCGTC 
GACAAGAACA ACGGGCCGGC GCAGCTGAAG GCCTTCATCA AGGAGCGCCA CCCGGGTGAC 
GCCGGCGTAG TCTACTGCCT GTCACGCGCC AAGGTCGAGG ATACCGCGGC GGCGCTGACC 
GAGGCCGGCA TCACCGCGAT CCCCTATCAT GCCGGGCTCG AGGCGAGCGT GCGTTCGCGC 
AACCAGGACC GCTTCATCAA CGAGGACGGC ATCGTCGTCG TCGCGACCGT CGCCTTCGGC 
ATGGGCATCG ACAAGCCCGA CGTGCGCTTC GTGGCGCATC TCGATCTGCC GAAAAGCATC 
GAGGCCTACT ACCAGGAAAC CGGACGCGCC GGGCGCGACG GCAAGCCGTC GACCGCCTGG 
ATGGCCTACG GCCTGTCCGA CATCGTGCAG CAGCGCCGGA TGATCGACGA GTCCACCGGC 
GCCGAGGCGT TCAAGCGGGT GTCGATCCGC AAGCTCGACG CGCTGGTGGC GCTGGCCGAG 
ACCGCCGGCT GCCGGCGCCG GCTGCTCCTG AGCTATTTCG GCGAGACCCC GGCGGACGAG 
AAATGTGGCA ATTGCGACAA TTGCCTGTCG CCGCCGCAGG TGCGCGACGG CAAAGTGATC 
GCGCAAAAGT TGCTGTCCTG TGCCTATCGC ACCGGGCAGC GCTTCGGCGC CATGCATTTG 
ATCGACGTGC TGGTGGGGCG CGCGACCGAG CGCGTCAAGC AGTTCGGACA TGATCAATTG 
TCAGTGTTCG GCGTCGGGCG CGAACTTAAT GAGAAGCAAT GGCGCGCGGC GCTGCGCCAG 
CTGGTGGCGA TGGGCCATCT CGCGCCGGAC AGCGAGGCCT ATGGCGCGCT GAAGCTGACG 
GAGAGCGCGC GCGGCGTGTT GAAGGGCGAG ACGCCGATCC TGCTGCGCGA GCAGACGGCG 
AGCACCGGCC GTGCGATCCG CAGCAAATCG CGGCGTGGCG ACCTGGTGCA GCGGCCGGCC 
GCGGCAGGCG ATGCCACGCT GCTCGCGCGC CTGCGGGCCT GGCGCTCGGA GATCGCGCGC 
AAGCGTGGTG TACCAGCCTA TGTCGTGCTG CACGACGCAA CCATCGATGG CATCGCCAGC 
GCCCGGCCGG CCACGCTCGG GCAGCTTCGC GACATCCCCG GGATCGGTGA CAAGAAGCTT 
GAACATTACG GCGACGAGTT GCTGGCGCTG ATCACGGCGG CAGGCGCCTC AGGATCAGGA 
TCGCCATCAG ACAGTTGA 

 

Protein sequence

MASAPNATTD TADRALAVLH SVFGLPGFRG AQEKVVRHVT AGGNCLVLMP TGGGKSLCYQ 
LPALLRKGCG IVVSPLIALM RDQVAGLTEA GVNAAVLNST LSREEADEVE RRLIAGDLDL 
LYVAPERLVT PRCLALLERA DIALFAIDEA HCVSQWGHDF RPEYIGLSII AERFPEVPRI 
ALTATADELT RKEIAERLGL TDAPQFVASF DRPNIRYEIV DKNNGPAQLK AFIKERHPGD 
AGVVYCLSRA KVEDTAAALT EAGITAIPYH AGLEASVRSR NQDRFINEDG IVVVATVAFG 
MGIDKPDVRF VAHLDLPKSI EAYYQETGRA GRDGKPSTAW MAYGLSDIVQ QRRMIDESTG 
AEAFKRVSIR KLDALVALAE TAGCRRRLLL SYFGETPADE KCGNCDNCLS PPQVRDGKVI 
AQKLLSCAYR TGQRFGAMHL IDVLVGRATE RVKQFGHDQL SVFGVGRELN EKQWRAALRQ 
LVAMGHLAPD SEAYGALKLT ESARGVLKGE TPILLREQTA STGRAIRSKS RRGDLVQRPA 
AAGDATLLAR LRAWRSEIAR KRGVPAYVVL HDATIDGIAS ARPATLGQLR DIPGIGDKKL 
EHYGDELLAL ITAAGASGSG SPSDS