| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6878 |
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| Symbol | omp16 |
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| ID | 5151593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 7204830 |
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| End bp | 7205279 |
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| Gene Length | 450 bp |
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| Protein Length | 149 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640561560 |
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| Product | Outer membrane lipoprotein omp16 precursor (peptidoglycan-associated lipoprotein) |
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| Protein accession | YP_001242671 |
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| Protein GI | 148258086 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | [TIGR02802] peptidoglycan-associated lipoprotein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.401181 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0290754 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCTCGCGG TCGCGCTGTC GATGGGCGCG TGTGCCAACA AGAATCTCAC CGGGGCCGAT
GGCGCGATGG CCAGCGCTGC CACGCCGGGC AGCCAGCAGG ACTTCGTCGT GAACGTGGGC
GACCGCGTCT TCTTCGAAAG CGACCAGACC GATCTGACGC CCCAGGCGAT CGCGACCCTG
GAGAAGCAGG CGCAGTGGCT GCAGACCTAT CCGCGTTACA GCTTCACGAT CGAAGGCCAT
GCCGACGAGC GTGGCACGCG CGAGTACAAC ATCGCGCTGG GCGCCCGGCG TGCGCAATCA
GTTCGCAACT TCCTGGTTTC GCGCGGCATC GACCAGGGTC GCATGCGCAC GATCTCCTAC
GGCAAGGAGC GGCCGGTCGC GGTTTGTAAC GATATCTCCT GCTGGTCGCA GAACCGCCGT
GCGGTCACGG TGCTGAACGC CAGTTCATAA
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| Protein sequence | MLAVALSMGA CANKNLTGAD GAMASAATPG SQQDFVVNVG DRVFFESDQT DLTPQAIATL
EKQAQWLQTY PRYSFTIEGH ADERGTREYN IALGARRAQS VRNFLVSRGI DQGRMRTISY
GKERPVAVCN DISCWSQNRR AVTVLNASS
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