| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6862 |
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| Symbol | |
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| ID | 5151543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 7183623 |
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| End bp | 7185617 |
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| Gene Length | 1995 bp |
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| Protein Length | 664 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640561544 |
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| Product | putative oligoendopeptidase F |
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| Protein accession | YP_001242655 |
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| Protein GI | 148258070 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1164] Oligoendopeptidase F |
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| TIGRFAM ID | [TIGR02290] oligoendopeptidase, pepF/M3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.916639 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.20394 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCGC GCGCTTCTTC CGCCCTCCGC AAGCCGACCA AGTCCGCTCC TCCGTCCAAA
ACCGCCAAGG CCAAGAAGGC CGCCGCCAAG CCGACGTCCG GCAAGCCGGC GTCCAACAAG
CCGGCGTCCA AGTCGAAACC GGCGGTCAAA GCAGGGCGTG GTGCAGCGGC CAAATCGTCC
GCCAAGCCCG CAAAGAAGGA GGTCGCGGCC AAGACGGGAA TCGGGACGCT GCCCGAATGG
AATCTCGGCG ACCTGTATAT GGGCATCGAC GCACCGGAGA TCGCTCACGA TCTCGCGAAG
ATGGATGCCG AATGCGTCGC GTTTGAGACG GATTACAAGG GCAAGCTCGC CGAGCATGTC
GCACGCGACG ATGGCGGCGA ATGGCTTGCA GCGGCCGTGC GGCGCTACGA GGCGATCGAC
GATCTTGCCG GCCGGCTTGG TTCATTCGCG GGCCTCGCGC ATGCCGGCGA CAGTGTCGAT
CCGGCGATTT CCAAATTCTA CGGCGATATC TCCGAGCGAC TGACCGCTGC ATCCACGCAT
CTGCTGTTCT TCCCGCTCGA GCTCAACCGC ATCGACGACG CGGTCATTGA GCGCGCGATG
GAGACGCCGG CGCTCGGCCA TTACCGGCCA TGGATCGAGG ATCTGCGCAA GGACAAGCCA
TATCAGCTCG AGGATCGCGT CGAGCAGCTG TTCCACGAGA AGTCGCAGAC GGGCTATTCG
GCCTGGAACC GGCTGTTCGA TCAGACCATC GCCGGTCTGC GCTTCCAGGT CGGGGGAAAG
GAGCTCGCGA TCGAGCCGAC CTTGAACTTC CTGCAGGACC GCGACGGTGC CAAGCGCAAG
GCGGCCGCCG AGGCGCTGGC CAAGACCTTC AAGGCCAATG AGCGCACCTT CGCGCTGATC
ACCAATACGC TGGCCAAGGA CAAGGACATC TCCGATCGCT GGCGCGGCTT CCAGGATGTC
GCGGATTCCC GCCATCTCAA CAACCGGGTC GAGCGCGAAG TGGTCGATGC GCTGGTGGCG
TCGGTGCGCG CGGCCTATCC GAAGCTGTCG CATCGCTACT ATCAACTGAA GGCGCGCTGG
TTCAAAAAGA AGAAGCTCGC GCATTGGGAC CGCAACGCGC CGTTGCCCTT CGCCGCCAAC
GCCACCATCG CCTGGCCGGA CGCCAAGAAC ATGGTGCTGA CGGCCTATCG CGGCTTCTCG
CCTGAAATGG CCGACATCGC CCAGCGCTTC TTCGACCAGA GCTGGATCGA TGCGCCGGTG
CGGCCGGGCA AGGCGCCGGG CGCGTTCTCG CATCCGACCA CGCCCTCGGC GCATCCCTAT
GTGCTGATGA ACTATCAGGG TAAGCCGCGC GACGTGATGA CGCTCGCGCA CGAGCTCGGC
CATGGCGTCC ACCAGGTGTT GGCGGCGAGG CAAGGCGCGC TGATGGCGCC GACGCCGCTG
ACGCTCGCCG AGACCGCGAG CGTGTTCGGC GAGATGCTGA CCTTCAAGCG CCTGTTGTCC
GAGACCCGCG ACGCCAAGCA GCGCCAGGCG CTGCTCGCCG GCAAGGTCGA GGACATGATC
AACACGGTGG TGCGGCAGAT CGCGTTCTAT TCGTTCGAGC GCGCCGTGCA CACCGAGCGC
AAGAATGGCG AGCTCACCGC CGAGCGGCTC GGTCAGATCT GGCTGTCGGT GCAGACCGAG
AGCCTCGGCG AAGCGATCGA GATCAAGCCG GGCTACGAGA ACTTCTGGAT GTACATCCCG
CACTTCATCC ATTCGCCGTT CTATGTCTAC GCCTATGCGT TCGGCGACTG CCTCGTGAAC
TCGCTCTATG CGGTCTACGA GCATGCCGCC GAGGGCTTCG CCGAGCGTTA TCTGGCGATG
CTCGCCGCCG GTGGCACCAA GCATTATTCC GAGCTGCTCG CCCCGTTCGG CCTGGACGCC
AAGGACCCGA AATTCTGGGA TGGCGGCCTG TCGGTCATCG CCGGCATGAT CGATGAGCTG
GAGCGGATGG GGTAG
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| Protein sequence | MTSRASSALR KPTKSAPPSK TAKAKKAAAK PTSGKPASNK PASKSKPAVK AGRGAAAKSS
AKPAKKEVAA KTGIGTLPEW NLGDLYMGID APEIAHDLAK MDAECVAFET DYKGKLAEHV
ARDDGGEWLA AAVRRYEAID DLAGRLGSFA GLAHAGDSVD PAISKFYGDI SERLTAASTH
LLFFPLELNR IDDAVIERAM ETPALGHYRP WIEDLRKDKP YQLEDRVEQL FHEKSQTGYS
AWNRLFDQTI AGLRFQVGGK ELAIEPTLNF LQDRDGAKRK AAAEALAKTF KANERTFALI
TNTLAKDKDI SDRWRGFQDV ADSRHLNNRV EREVVDALVA SVRAAYPKLS HRYYQLKARW
FKKKKLAHWD RNAPLPFAAN ATIAWPDAKN MVLTAYRGFS PEMADIAQRF FDQSWIDAPV
RPGKAPGAFS HPTTPSAHPY VLMNYQGKPR DVMTLAHELG HGVHQVLAAR QGALMAPTPL
TLAETASVFG EMLTFKRLLS ETRDAKQRQA LLAGKVEDMI NTVVRQIAFY SFERAVHTER
KNGELTAERL GQIWLSVQTE SLGEAIEIKP GYENFWMYIP HFIHSPFYVY AYAFGDCLVN
SLYAVYEHAA EGFAERYLAM LAAGGTKHYS ELLAPFGLDA KDPKFWDGGL SVIAGMIDEL
ERMG
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