| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6783 |
|---|
| Symbol | |
|---|
| ID | 5154360 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 7066400 |
|---|
| End bp | 7066984 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640561466 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001242579 |
|---|
| Protein GI | 148257994 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4636] Uncharacterized protein conserved in cyanobacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.0570349 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACATCA AGGTCGATCC GGCGGCGGTC ACGCCCGAGC AATTCTTTTC CTGGGTGACG
ACACAGGACG GGCGCTACGA GCTCGTCGAT GGCGAAGTCG TGATGATGGC CGGCGCCGGC
CGGCGCCACG ATGCCATCGT CGTGAACCTG ACGGCGGCGC TGCACGCACA AACCCGGAGC
GGTCCGTGTC AGACCTTCAC CGGCGGCACC TACGTGGTGA CCACCCCGTC GACCCGCCGC
ATGCCGGACC TGGGCGTCGA TTGCGGCAAG CCTGCCGAGG ACTCGCTGGT GGCTGACCGG
CCGGCGCTGC TGGTCGAGGT GCTGTCGCCG ACCACAGGCG GCTTCGACGT CACCGTCAAA
CTGGCCGAGT ATCAGGCGCT GCCGTGCCTC GACTACATCC TGTTCGTCGA CACTGACAGC
CCCAATGTCC ACCTCTATTC GCGCGGTCCG GACAGCGCCT GGACGGACGC CGTACTGAAG
GGGCTCGACG CAATCATCCG GCTCGACACG CTGAACGTCA CGCTCCGCCT GCACGACGTC
TATGCCGGCC TGGAATTCCG TCCACGACCA CGCCTCGTCG AGTAA
|
|---|
| Protein sequence | MNIKVDPAAV TPEQFFSWVT TQDGRYELVD GEVVMMAGAG RRHDAIVVNL TAALHAQTRS
GPCQTFTGGT YVVTTPSTRR MPDLGVDCGK PAEDSLVADR PALLVEVLSP TTGGFDVTVK
LAEYQALPCL DYILFVDTDS PNVHLYSRGP DSAWTDAVLK GLDAIIRLDT LNVTLRLHDV
YAGLEFRPRP RLVE
|
|---|
| |