Gene BBta_6718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6718 
Symbol 
ID5155357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp7000962 
End bp7002614 
Gene Length1653 bp 
Protein Length550 aa 
Translation table11 
GC content66% 
IMG OID640561406 
Producthypothetical protein 
Protein accessionYP_001242520 
Protein GI148257935 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3637] Opacity protein and related surface antigens 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCGCG TATTTGGCGT GTGTCTTTGC CTATCGACTT TCGCGGGAAG TACGACATCG 
GTCTGGGCGA CTGATCTCGC TCTGCCTCCT CCGCTCCCAC CGCCCGACAT CGTCGCCTAC
AGGTGGAGCG GCTGTCATGC CGGCGCCAAT GGCGGCTATG CCTGGTCGCG TCAGCAGCAG
ACCTGGAGCC GCAGCGCCAA TGCCGCCGCA GCGCCTGTCC CGGCGGTGTT GCAGCCCGCC
GCGCCGCCGG CCGGCAATGC CGGCAATGCT CCGCCAGCGA ACCCTCCGGC GGCCAATCCG
CCGGTCGTCG CGAAGCCGGT GCCTACGCCG CCGAACACTC CGAACACTGG CGGCGGCAAG
CCGCCATACA AGCCGCCGGT CTATGGTCAG CACGGCGACA AGGGATGGTG GCAGCCGTCG
AACCATGATC ACGGCGGCAA GGATCATGAT GGGTGGCAGT ACGGCCACAA GCATGGCAAG
CCCGATCGTG ATGATGGTCA TTATTGGCCG CAATGGGGGA CAAAGGACGG CGGCAGCAAG
TACGCCGACC ATGACTGGGG ATGGCATGCG CCGTCCACCA AGGACAGCAA CTACTCCTCC
AAGGACAGCA ACTATAAAGA CGACAGGCAC GCCGGCGAGG GCTGGTCGCA GCTGCATTCG
AGCGGCTACG CCGACAGGCT GGCCTGGCTG CGCCACGACG ATCACGAGCG GCCGGGCTAT
GGCTGGTCGT CACAGCCCGC CGCCGACAAG CACGAGGCCG AGCTCTGGAA GAGCCATGGC
GGCAAGGACA ATTGGGGCAA GGATAACTGG GGCAAGGACA ATTGGTTCAA GAATGATTGG
GCCAAGCATG ACGGCAAGGA TGACGGCAAG CATGACCATG GCGGTTACGC CTGGAAGCCG
GTGCCGCCGC ACAAGCCCGG CTGGCCGCCG AAGACCCCGC CCGCCAACAA CAATGCCGGC
CAGCCGCCAC AGCAACCGCC GGTCCAAGGT AACAACAATC AAGGTAACAA CAATCAGGGC
AACAACCAGG CCAATAATGG CGGCGCTACG CCGCAGAACC CTGCGCCTGT CGCCGGTGCC
GTCGCGCCGC TGCCACAGGC GGCGCTGCTG CAGACGCCGG CCAATGTCGC GAGCAATGGC
GGCGACGTGA TCGGCGGCGT GCAGCTCGGC TGCGACTATC AGATCGACCG ATTCGTGCTC
GGCATCCAGG CGATGGCCGA TCTCGGCATC ATCAACGCCT CCACCGCGGT GGCGCCGCAG
CTGACCTTGA ACGCGCGGAC CAGCAATCTC TATACGGCGA CCGTGCGGGC CGGCTATCTG
GTGACCCCGG AGGTGCTGCT CTATGCGCGC GGCGGTGCGG CCTGGACGCG GACCAGCGTA
ACGGCGGTCA ACGCCGCCAA CGGTCAATCC GCAAGCGCGG CGTTCAACCG CAGCGGCTGG
ACGGTCGGCG CCGGCGTCGA ATGGATGTTC GCCCGCAACT GGTCGGCCTT CGCCGAATAT
GATTATGCGG ATTTCGGCAC GGTGACGGGC AGGTTGCCGG GCGCGGCCGC GGTGACCGGC
GGGCCCGATG TCGTCAGCCT GAACACCAAG ATCCATACCG CGCTGGTCGG CGTGAACTAC
CGGTTCGAGA TGCTCGCGCG CGCCGGCCGC TGA
 
Protein sequence
MRRVFGVCLC LSTFAGSTTS VWATDLALPP PLPPPDIVAY RWSGCHAGAN GGYAWSRQQQ 
TWSRSANAAA APVPAVLQPA APPAGNAGNA PPANPPAANP PVVAKPVPTP PNTPNTGGGK
PPYKPPVYGQ HGDKGWWQPS NHDHGGKDHD GWQYGHKHGK PDRDDGHYWP QWGTKDGGSK
YADHDWGWHA PSTKDSNYSS KDSNYKDDRH AGEGWSQLHS SGYADRLAWL RHDDHERPGY
GWSSQPAADK HEAELWKSHG GKDNWGKDNW GKDNWFKNDW AKHDGKDDGK HDHGGYAWKP
VPPHKPGWPP KTPPANNNAG QPPQQPPVQG NNNQGNNNQG NNQANNGGAT PQNPAPVAGA
VAPLPQAALL QTPANVASNG GDVIGGVQLG CDYQIDRFVL GIQAMADLGI INASTAVAPQ
LTLNARTSNL YTATVRAGYL VTPEVLLYAR GGAAWTRTSV TAVNAANGQS ASAAFNRSGW
TVGAGVEWMF ARNWSAFAEY DYADFGTVTG RLPGAAAVTG GPDVVSLNTK IHTALVGVNY
RFEMLARAGR