| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6710 |
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| Symbol | rbsA |
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| ID | 5155793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 6990661 |
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| End bp | 6992184 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640561398 |
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| Product | ABC transporter, ATP binding subunit (putative high-affinity D-ribose transport) |
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| Protein accession | YP_001242512 |
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| Protein GI | 148257927 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.11533 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0914748 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGTC CGATCCTCGA GATGCGCGGG GTGTCGAAAT CATTCTTCGG CATCAAGGCC
CTGCAGAAGG TCGATCTGAC CGTCTATGCC GGTGAAGTCC ATGCTCTGAT GGGCGAAAAC
GGCGCCGGCA AATCCACGCT CATGAAGATT CTCTCCGGCG CCTATCGGCC CGATCCGGGC
GGCGAGATCC GGATCGACGG GCACCCGGTG CGCATCGAGG GACCGCTCGG CGGCCGCGCC
GCGGGCATTT CCATCATCTA CCAGGAGTTG TCACTGGCGC CAAACTTGAC GGTCGCGGAG
AATATCTATC TCGGCCGCGA AGTGTCGCAA TCGGGCCTGT TGGCACGCGG GGCGATGCGC
GAGGGCGTCG GTCCGATCCT GACGCGGCTG GGTGCTGATT TTGCAGCCTC GACGCTGGTC
GCCGAGCTGT CGATGGGCCA GCGCCAGCTG GTCGAGATCG CCCGCGCGCT GCATGCGCGC
TCCAAGATCC TGATCATGGA CGAGCCGACC ACATCGCTCT CGGCCGGCGA GAGCGAGAAA
CTGTTCGCGC TGATCCGCCA GCTGCGCGCC GAAGGGCTCG CGATCATCTA TATCTCGCAC
CGCATGGACG AGGTCTATGC GCTCGGCGAC CGCGTCACCG TGCTGCGCGA CGGCCGCCTC
GTCGGCTCGC TGGATAAGCC GGAGATCCGC GCCGACAGCA TCGTCCGCAT GATGGTCGGA
CGCGACGTGT CGTCGTTCTA CAAGAAGGAT CACGATCCGC ATGCCAAGCG CGACCGCCCG
GTGCTCACCG CGGTCGATCT CGGCGACGGC CATCGCGTCA AGGGCTGCTC GCTCACCGTG
CATGCCGGCG AGGTCGTCGG CCTCGCCGGG CTGATCGGCG CCGGGCGCAC CGAGCTCGCT
CATCTGATCA TCGGCGCCAC GCCGAAGATG ACCGGCCATG TCACGCTCGA CGGCGAGCGG
ATCGAGATCG AGACGCCGCG CGACGCGCTT GACGCCGGCA TCGCCTATCT CACCGAGGAC
CGCAAGGCGC TCGGCCTGTT CCTCGACATG TCCTGCGCCG ACAACATCAA CCTCGCAGTG
ATCGGGCGCG ATGCGCGACT CGGCGGCGTT CTGGATCGCG ACAAAGCGCG CCTGCGGGCC
GACGAGGCGT TCAGCGCGCT CGGCATCCGG GCGCCCAATC CGGGCGTCAC TGTCGGCGGC
CTGTCGGGCG GCAACCAGCA GAAGGTGCTG CTGTCGCGCC TGCTCGCAAC CGCGCCGAAA
GTGCTGATCC TGGACGAGCC GACGCGCGGC GTCGACGTCG GGGCCAAGTC CGAGATCTAT
TCGATCATCG ACAATCTCGC CAAGTCGGGT ACCGCGATCC TGGTGATCTC CTCCGACCTG
CCCGAGATTC TCGGCATCTG CGACCGCGTG CTGGTGATGC GCTGCGGCCA ACTCGCCGGC
GAGCTGCAAC AGAGCGCAAC AACTCCCATC ACCCAGGAAG ACATCATGGC ACTGGCCACC
GGGACGGAGC ACGTCCATGC CTGA
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| Protein sequence | MSGPILEMRG VSKSFFGIKA LQKVDLTVYA GEVHALMGEN GAGKSTLMKI LSGAYRPDPG
GEIRIDGHPV RIEGPLGGRA AGISIIYQEL SLAPNLTVAE NIYLGREVSQ SGLLARGAMR
EGVGPILTRL GADFAASTLV AELSMGQRQL VEIARALHAR SKILIMDEPT TSLSAGESEK
LFALIRQLRA EGLAIIYISH RMDEVYALGD RVTVLRDGRL VGSLDKPEIR ADSIVRMMVG
RDVSSFYKKD HDPHAKRDRP VLTAVDLGDG HRVKGCSLTV HAGEVVGLAG LIGAGRTELA
HLIIGATPKM TGHVTLDGER IEIETPRDAL DAGIAYLTED RKALGLFLDM SCADNINLAV
IGRDARLGGV LDRDKARLRA DEAFSALGIR APNPGVTVGG LSGGNQQKVL LSRLLATAPK
VLILDEPTRG VDVGAKSEIY SIIDNLAKSG TAILVISSDL PEILGICDRV LVMRCGQLAG
ELQQSATTPI TQEDIMALAT GTEHVHA
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